Plant Transcription factor database - Universität Potsdam
version: 3.0

Physcomitrella patens ABI3VP1 Family

Description

Suzuki et al. 1997: When expressed and purified as a separate peptide, the B3 domain has a highly cooperative DNA binding activity that is specific for the Sph sequence. We find that the properties of this activity are in compelling agreement with the functional analyses of VP1 and regulatory sequences in the C7 promoter. These results identify a new class of DNA binding proteins, which thus far are known only in the plant kingdom, that have critical functions in development.

Members of this family
  SHOULD possess B3 domain
  SHOULD NOT possess AP2 Auxin_resp domains

Domain alignments

This family is also present in:

References

There are 30 gene models in this family



Gene modelDescriptionDomains
100669 fgenesh1_pg.scaffold_434000013 B3
112999 e_gw1.5.283.1 B3
113682 e_gw1.7.378.1 B3
120152 e_gw1.31.55.1 B3 zf-CW
127167 e_gw1.63.43.1 B3
140461 e_gw1.167.53.1 B3
150354 e_gw1.314.42.1 B3
158812 estExt_fgenesh1_pg.C_70056 B3
161559 estExt_fgenesh1_pg.C_340046 B3 LysM
161610 estExt_fgenesh1_pg.C_340127 B3
166568 estExt_fgenesh1_pg.C_1180136 B3
168363 estExt_fgenesh1_pg.C_1730068 B3
171881 estExt_fgenesh1_pg.C_3160007 B3 DnaJ
227676 estExt_Genewise1.C_4340016 B3
29466 gw1.278.21.1 B3
33929 gw1.75.92.1 B3
39100 gw1.3.388.1 B3
39201 gw1.21.188.1 B3
47563 gw1.162.133.1 B3
70276 fgenesh1_pg.scaffold_27000105 B3
71426 fgenesh1_pg.scaffold_32000138 AT_hook B3
71904 fgenesh1_pg.scaffold_34000169 B3
74293 fgenesh1_pg.scaffold_46000135 B3
77514 fgenesh1_pg.scaffold_65000141 B3
84275 fgenesh1_pg.scaffold_121000076 B3
86215 fgenesh1_pg.scaffold_143000042 B3
88498 fgenesh1_pg.scaffold_170000044 B3
89186 fgenesh1_pg.scaffold_179000039 B3
93515 fgenesh1_pg.scaffold_243000041 B3
98143 fgenesh1_pg.scaffold_344000018 B3

General references

Nag, R; Maity, MK; Dasgupta, M. 2005. Dual DNA binding property of ABA insensitive 3 like factors targeted to promoters responsive to ABA and auxin. Plant Mol. Biol. 59(5):821-38 PUBMEDID:16270233
Suzuki, M; Kao, CY; McCarty, DR. 1997. The conserved B3 domain of VIVIPAROUS1 has a cooperative DNA binding activity. Plant Cell 9(5):799-807 PUBMEDID:9165754