version: 3.0
Micromonas sp. RCC299 BSD Family
Description
Doerks et al. 2002: The novel domain BSD is present in basal transcription factors, synapse-associated proteins and several hypothetical proteins. It occurs in a variety of species ranging from primal protozoan to human. The BSD domain is characterized by three predicted ? helices, which probably form a three-helical bundle, as well as by conserved tryptophan and phenylalanine residues, located at the C terminus of the domain.
Members of this familySHOULD possess BSD domain
This family is also present in:
- Galdieria sulphuraria
- Micromonas pusilla CCMP1545
- Ostreococcus lucimarinus
- Ostreococcus tauri
- Chlamydomonas reinhardtii
- Chlorella sp. NC64A
- Coccomyxa sp. C-169
- Physcomitrella patens
- Selaginella moellendorffii
- Oryza sativa subsp. indica
- Oryza sativa subsp. japonica
- Sorghum bicolor
- Zea mays
- Arabidopsis lyrata
- Arabidopsis thaliana
- Carica papaya
- Populus trichocarpa
- Vitis vinifera
There are 2 gene models in this family
General references
Doerks, T; Huber, S; Buchner, E; Bork, P. 2002. BSD: a novel domain in transcription factors and synapse-associated proteins. Trends Biochem. Sci. 27(4):168-70 PUBMEDID:11943536Design qRT-PCR primers using Quantprime