Plant Transcription factor database - Universität Potsdam
version: 3.0

Arabidopsis lyrata C2C2-CO-like Family

Description

Lagercrantz & Axelsson. 2000: A family of CONSTANS LIKE genes (COLs) has recently been identified in Arabidopsis thaliana and other plant species. CONSTANS, the first isolated member, is a putative zinc finger transcription factor that promotes the induction of flowering in A. thaliana in long photoperiods.

Members of this family
  SHOULD possess CCT zf-B_box domains
  SHOULD NOT possess GATA PLATZ domains

Domain alignments

This family is also present in:

References

There are 17 gene models in this family



Gene modelDescriptionDomains
318927 fgenesh1_pm.C_scaffold_3001943 CCT zf-B_box
321080 fgenesh1_pm.C_scaffold_4001137 CCT zf-B_box
329983 fgenesh1_pm.C_scaffold_7002210 CCT zf-B_box
472829 fgenesh2_kg.1__2783__AT1G25440.1 CCT zf-B_box
473005 fgenesh2_kg.1__2959__AT1G28050.1 CCT zf-B_box
476523 fgenesh2_kg.2__1653__AT1G73870.1 CCT zf-B_box
477472 fgenesh2_kg.3__173__AT3G02380.1 CCT zf-B_box
478095 fgenesh2_kg.3__796__AT3G07650.3 CCT zf-B_box
481339 fgenesh2_kg.4__399__AT2G24790.1 CCT zf-B_box
483978 fgenesh2_kg.4__3038__AT2G47890.1 CCT zf-B_box
488429 fgenesh2_kg.6__1563__AT5G15840.1 CCT zf-B_box
488432 fgenesh2_kg.6__1566__AT5G15850.1 CCT zf-B_box
489353 fgenesh2_kg.6__2487__AT5G24930.1 CCT zf-B_box
495863 fgenesh2_kg.8__1679__AT5G57660.1 CCT zf-B_box
891757 scaffold_104551.1 CCT zf-B_box
894620 scaffold_201694.1 CCT zf-B_box
917718 scaffold_801118.1 CCT zf-B_box

General references

Lagercrantz, U; Axelsson, T. 2000. Rapid evolution of the family of CONSTANS LIKE genes in plants. Mol. Biol. Evol. 17(10):1499-507 PUBMEDID:11018156