Plant Transcription factor database - Universität Potsdam
version: 3.0

Oryza sativa subsp. indica C2C2-CO-like Family

Description

Lagercrantz & Axelsson. 2000: A family of CONSTANS LIKE genes (COLs) has recently been identified in Arabidopsis thaliana and other plant species. CONSTANS, the first isolated member, is a putative zinc finger transcription factor that promotes the induction of flowering in A. thaliana in long photoperiods.

Members of this family
  SHOULD possess CCT zf-B_box domains
  SHOULD NOT possess GATA PLATZ domains

Domain alignments

This family is also present in:

References

There are 15 gene models in this family



Gene modelDescriptionDomains
OsIBCD004792 Chr02_113,1251,,,1,1251, CCT zf-B_box
OsIBCD005259 Chr02_809,1044,,,1,1044, CCT zf-B_box
OsIBCD007172 Chr02_3949,999,,,1,999, CCT zf-B_box
OsIBCD007817 Chr02_4904,1431,,,1,1431, CCT zf-B_box
OsIBCD007866 Chr02_4977,1362,,,1,1362, CCT zf-B_box
OsIBCD010152 Chr03_2254,1212,,,1,1212, CCT zf-B_box
OsIBCD011751 Chr03_5060,1266,,,1,1266, CCT zf-B_box
OsIBCD014855 Chr04_3530,867,,,1,867, CCT zf-B_box
OsIBCD019118 Chr06_26,684,,,1,684, CCT zf-B_box
OsIBCD020081 Chr06_1495,1344,,,1,1344, CCT zf-B_box
OsIBCD020133 Chr06_1582,2100,,,1,2100, CCT zf-B_box
OsIBCD021639 Chr06_4200,1113,,,1,1113, CCT zf-B_box
OsIBCD024527 Chr07_4021,1143,,,1,1143, CCT zf-B_box
OsIBCD027227 Chr08_4273,1827,,,1,1827, CCT zf-B_box
OsIBCD043666 Chr08_1465,903,,,1,903, CCT zf-B_box

General references

Lagercrantz, U; Axelsson, T. 2000. Rapid evolution of the family of CONSTANS LIKE genes in plants. Mol. Biol. Evol. 17(10):1499-507 PUBMEDID:11018156