Plant Transcription factor database - Universität Potsdam
version: 3.0

Populus trichocarpa C2C2-CO-like Family

Description

Lagercrantz & Axelsson. 2000: A family of CONSTANS LIKE genes (COLs) has recently been identified in Arabidopsis thaliana and other plant species. CONSTANS, the first isolated member, is a putative zinc finger transcription factor that promotes the induction of flowering in A. thaliana in long photoperiods.

Members of this family
  SHOULD possess CCT zf-B_box domains
  SHOULD NOT possess GATA PLATZ domains

Domain alignments

This family is also present in:

References

There are 16 gene models in this family



Gene modelDescriptionDomains
179268 gw1.I.7868.1 CCT zf-B_box
216773 gw1.VII.1078.1 CCT zf-B_box
247140 gw1.XIV.3883.1 CCT zf-B_box
266027 gw1.123.49.1 CCT zf-B_box
409151 gw1.II.486.1 CCT zf-B_box
419707 gw1.VIII.1135.1 CCT zf-B_box
562026 eugene3.00061985 CCT zf-B_box
564570 eugene3.00081165 CCT zf-B_box
658893 grail3.0006033201 CCT zf-B_box
737468 estExt_Genewise1_v1.C_LG_XVIII2045 CCT zf-B_box
737847 estExt_Genewise1_v1.C_LG_XVIII2926 CCT zf-B_box
752788 fgenesh4_pg.C_LG_I002391 CCT zf-B_box
782168 fgenesh4_pg.C_scaffold_64000030 CCT zf-B_box
831202 estExt_fgenesh4_pm.C_LG_IV0339 CCT zf-B_box
836808 estExt_fgenesh4_pm.C_820020 CCT zf-B_box
837482 estExt_fgenesh4_pm.C_1710004 CCT zf-B_box

General references

Lagercrantz, U; Axelsson, T. 2000. Rapid evolution of the family of CONSTANS LIKE genes in plants. Mol. Biol. Evol. 17(10):1499-507 PUBMEDID:11018156