Plant Transcription factor database - Universität Potsdam
version: 3.0

Carica papaya C2H2 Family

Description

Englbrecht et al. 2004: C2H2 zinc fingers (ZF) display a wide range of functions, from DNA or RNA binding to the involvement in protein-protein interactions. Therefore ZFPs not only act in transcriptional regulation, either directly or through site-specific modification and/or regulation of chromatin, but also participate in RNA metabolism and in other cellular functions that probably require specific protein contacts of the ZF domain.

Members of this family
  SHOULD possess zf-C2H2 domain
  SHOULD NOT possess PHD domain

Domain alignments

This family is also present in:

References

There are 69 gene models in this family



Gene modelDescriptionDomains
evm.TU.supercontig_1.103 zf-C2H2
evm.TU.supercontig_1.211 zf-C2H2
evm.TU.supercontig_1.3 zf-C2H2
evm.TU.supercontig_10.93 zf-C2H2
evm.TU.supercontig_107.72 zf-C2H2
evm.TU.supercontig_111.53 zf-C2H2
evm.TU.supercontig_116.88 zf-C2H2
evm.TU.supercontig_12.70 zf-C2H2
evm.TU.supercontig_127.8 zf-C2H2
evm.TU.supercontig_1307.1 zf-C2H2
evm.TU.supercontig_138.44 zf-C2H2
evm.TU.supercontig_14.159 zf-C2H2
evm.TU.supercontig_158.1 zf-C2H2
evm.TU.supercontig_161.1 zf-C2H2
evm.TU.supercontig_163.28 zf-C2H2
evm.TU.supercontig_18.1 zf-C2H2
evm.TU.supercontig_19.273 zf-C2H2
evm.TU.supercontig_2.109 zf-C2H2
evm.TU.supercontig_2.133 zf-C2H2
evm.TU.supercontig_2.81 zf-C2H2
evm.TU.supercontig_2.82 zf-C2H2
evm.TU.supercontig_20.206 zf-C2H2
evm.TU.supercontig_2070.1 zf-C2H2
evm.TU.supercontig_21.165 zf-C2H2
evm.TU.supercontig_212.11 zf-C2H2
evm.TU.supercontig_216.25 zf-C2H2
evm.TU.supercontig_233.14 zf-C2H2
evm.TU.supercontig_235.19 zf-C2H2
evm.TU.supercontig_235.8 zf-C2H2
evm.TU.supercontig_239.1 zf-C2H2
evm.TU.supercontig_249.5 zf-C2H2
evm.TU.supercontig_25.50 zf-C2H2
evm.TU.supercontig_26.34 zf-C2H2
evm.TU.supercontig_29.160 zf-C2H2
evm.TU.supercontig_29.92 zf-C2H2
evm.TU.supercontig_30.97 zf-C2H2
evm.TU.supercontig_36.12 zf-C2H2
evm.TU.supercontig_4.50 JmjC JmjN zf-C2H2
evm.TU.supercontig_42.39 zf-C2H2
evm.TU.supercontig_44.94 zf-C2H2
evm.TU.supercontig_44.95 zf-C2H2
evm.TU.supercontig_45.58 zf-C2H2
evm.TU.supercontig_47.61 zf-C2H2
evm.TU.supercontig_48.109 zf-C2H2
evm.TU.supercontig_48.73 zf-C2H2
evm.TU.supercontig_5.333 zf-C2H2
evm.TU.supercontig_5.73 zf-C2H2
evm.TU.supercontig_5.82 zf-C2H2
evm.TU.supercontig_50.47 zf-C2H2
evm.TU.supercontig_50.48 zf-C2H2
evm.TU.supercontig_51.84 zf-C2H2
evm.TU.supercontig_52.112 zf-C2H2
evm.TU.supercontig_53.161 zf-C2H2
evm.TU.supercontig_53.93 zf-C2H2
evm.TU.supercontig_6.32 zf-C2H2
evm.TU.supercontig_64.65 zf-C2H2
evm.TU.supercontig_66.17 zf-C2H2
evm.TU.supercontig_66.18 zf-C2H2
evm.TU.supercontig_66.59 zf-C2H2
evm.TU.supercontig_7.131 zf-C2H2
evm.TU.supercontig_70.100 zf-C2H2
evm.TU.supercontig_752.2 zf-C2H2
evm.TU.supercontig_84.73 zf-C2H2
evm.TU.supercontig_85.134 zf-C2H2
evm.TU.supercontig_9.169 zf-C2H2
evm.TU.supercontig_9.185 zf-C2H2
evm.TU.supercontig_9.93 zf-C2H2
evm.TU.supercontig_92.40 zf-C2H2
evm.TU.supercontig_92.92 zf-C2H2

General references

Ciftci-Yilmaz, S; Mittler, R. 2008. The zinc finger network of plants. Cell. Mol. Life Sci. 65(7-8):1150-60 PUBMEDID:18193167
Iuchi, S. 2001. Three classes of C2H2 zinc finger proteins. Cell. Mol. Life Sci. 58(4):625-35 PUBMEDID:11361095
Takatsuji, H. 1999. Zinc-finger proteins: the classical zinc finger emerges in contemporary plant science. Plant Mol. Biol. 39(6):1073-8 PUBMEDID:10380795