Plant Transcription factor database - Universität Potsdam
version: 3.0

Selaginella moellendorffii C2H2 Family

Description

Englbrecht et al. 2004: C2H2 zinc fingers (ZF) display a wide range of functions, from DNA or RNA binding to the involvement in protein-protein interactions. Therefore ZFPs not only act in transcriptional regulation, either directly or through site-specific modification and/or regulation of chromatin, but also participate in RNA metabolism and in other cellular functions that probably require specific protein contacts of the ZF domain.

Members of this family
  SHOULD possess zf-C2H2 domain
  SHOULD NOT possess PHD domain

Domain alignments

This family is also present in:

References

There are 38 gene models in this family



Gene modelDescriptionDomains
110103 e_gw1.39.556.1 zf-C2H2
110681 e_gw1.40.532.1 zf-C2H2
117908 e_gw1.57.60.1 zf-C2H2
233860 fgenesh1_pm.C_scaffold_51000052 zf-C2H2
28310 gw1.20.334.1 zf-C2H2
34350 gw1.40.292.1 zf-C2H2
35059 gw1.7.651.1 zf-C2H2
36987 gw1.21.321.1 zf-C2H2
404286 fgenesh2_pg.C_scaffold_2000274 JmjC JmjN zf-C2H2
405132 fgenesh2_pg.C_scaffold_3000355 zf-C2H2
405772 fgenesh2_pg.C_scaffold_4000346 Reticulon zf-C2H2
405785 fgenesh2_pg.C_scaffold_4000359 zf-C2H2
410097 fgenesh2_pg.C_scaffold_11000480 zf-C2H2
410896 fgenesh2_pg.C_scaffold_13000394 zf-C2H2
411620 fgenesh2_pg.C_scaffold_15000222 zf-C2H2
414957 fgenesh2_pg.C_scaffold_25000197 zf-C2H2
416804 fgenesh2_pg.C_scaffold_32000042 zf-C2H2
421852 fgenesh2_pg.C_scaffold_54000019 zf-C2H2
424361 fgenesh2_pg.C_scaffold_66000167 zf-C2H2
424602 fgenesh2_pg.C_scaffold_68000083 zf-C2H2
430201 fgenesh2_pg.C_scaffold_126000001 zf-C2H2
438136 estExt_fgenesh2_pg.C_20109 JmjC JmjN zf-C2H2
438933 estExt_fgenesh2_pg.C_40631 zf-C2H2
440762 estExt_fgenesh2_pg.C_120159 JmjC JmjN zf-C2H2
56696 gw1.39.439.1 zf-C2H2
57114 gw1.51.409.1 zf-C2H2
58350 gw1.38.494.1 zf-C2H2
58353 gw1.30.483.1 zf-C2H2
68340 gw1.7.1297.1 zf-C2H2
76899 e_gw1.1.2090.1 zf-C2H2
80646 e_gw1.3.137.1 zf-C2H2
84151 e_gw1.6.73.1 zf-C2H2
84658 e_gw1.6.1071.1 MOZ_SAS zf-C2H2
9104 gw1.24.73.1 zf-C2H2
9108 gw1.37.55.1 zf-C2H2
9109 gw1.10.84.1 zf-C2H2
93509 e_gw1.14.95.1 zf-C2H2
99518 e_gw1.22.579.1 zf-C2H2

General references

Ciftci-Yilmaz, S; Mittler, R. 2008. The zinc finger network of plants. Cell. Mol. Life Sci. 65(7-8):1150-60 PUBMEDID:18193167
Iuchi, S. 2001. Three classes of C2H2 zinc finger proteins. Cell. Mol. Life Sci. 58(4):625-35 PUBMEDID:11361095
Takatsuji, H. 1999. Zinc-finger proteins: the classical zinc finger emerges in contemporary plant science. Plant Mol. Biol. 39(6):1073-8 PUBMEDID:10380795