Plant Transcription factor database - Universität Potsdam
version: 3.0

Arabidopsis thaliana CCAAT Family

Description

Bernadt et al. 2005: NF-Y is a bifunctional transcription factor capable of activating or repressing transcription. NF-Y specifically recognizes CCAAT box motifs present in many eukaryotic promoters. The mechanisms involved in regulating its activity are poorly understood.

Members of this family
  SHOULD possess CBFB_NFYA CBFD_NFYB_HMF CCAAT-Dr1 NF-YB NF-YC domains

Domain alignments

This family is also present in:

References

There are 72 gene models in this family



Gene modelDescriptionDomains
AT1G07980.1 histone-like transcription factor (CBF/NF-Y) family protein NF-YC CBFD_NFYB_HMF
AT1G08880.1 G-H2AX/GAMMA-H2AX/H2AXA/HTA5; DNA binding NF-YC CBFD_NFYB_HMF Histone
AT1G08970.1 HAP5C (HEME ACTIVATED PROTEIN 5C); DNA binding / transcription factor NF-YC CBFD_NFYB_HMF Histone
AT1G08970.2 HAP5C (HEME ACTIVATED PROTEIN 5C); DNA binding / transcription factor NF-YC CBFD_NFYB_HMF Histone
AT1G08970.3 HAP5C (HEME ACTIVATED PROTEIN 5C); DNA binding NF-YC CBFD_NFYB_HMF Histone
AT1G08970.4 HAP5C (HEME ACTIVATED PROTEIN 5C); DNA binding NF-YC CBFD_NFYB_HMF Histone
AT1G09030.1 histone-like transcription factor (CBF/NF-Y) family protein NF-YB CBFD_NFYB_HMF
AT1G17590.1 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT1G17590.2 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT1G17590.3 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT1G21970.1 LEC1 (LEAFY COTYLEDON 1); transcription factor NF-YB CBFD_NFYB_HMF
AT1G30500.1 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT1G30500.2 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT1G51060.1 HTA10; DNA binding NF-YC CBFD_NFYB_HMF Histone
AT1G54160.1 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT1G54690.1 G-H2AX/GAMMA-H2AX/H2AXB/HTA3; DNA binding NF-YC CBFD_NFYB_HMF Histone
AT1G54830.1 CCAAT-box binding transcription factor Hap5a, putative NF-YC CBFD_NFYB_HMF Histone
AT1G54830.2 CCAAT-box binding transcription factor Hap5a, putative NF-YC CBFD_NFYB_HMF Histone
AT1G54830.3 CCAAT-box binding transcription factor Hap5a, putative NF-YC CBFD_NFYB_HMF Histone
AT1G56170.1 HAP5B (Heme activator protein (yeast) homolog 5B); DNA binding / transcription factor NF-YC CBFD_NFYB_HMF Histone
AT1G56170.2 HAP5B (Heme activator protein (yeast) homolog 5B) NF-YC CBFD_NFYB_HMF Histone
AT1G72830.1 HAP2C (Heme activator protein (yeast) homolog 2C); transcription factor CBFB_NFYA
AT1G72830.2 HAP2C (Heme activator protein (yeast) homolog 2C); transcription factor CBFB_NFYA
AT1G72830.3 HAP2C (Heme activator protein (yeast) homolog 2C); transcription factor CBFB_NFYA
AT2G13570.1 CCAAT-box binding transcription factor, putative NF-YB CBFD_NFYB_HMF
AT2G27470.1 CCAAT-box binding transcription factor subunit HAP3-related NF-YB NF-YC CBFD_NFYB_HMF
AT2G34720.1 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT2G37060.1 CCAAT-box binding transcription factor, putative NF-YB CBFD_NFYB_HMF
AT2G37060.2 CCAAT-box binding transcription factor, putative NF-YB CBFD_NFYB_HMF
AT2G37060.3 CCAAT-box binding transcription factor, putative NF-YB CBFD_NFYB_HMF
AT2G38880.1 ATHAP3/ATNF-YB1/HAP3/HAP3A (NUCLEAR FACTOR Y SUBUNIT B1); transcription factor NF-YB CBFD_NFYB_HMF
AT2G38880.2 ATHAP3/ATNF-YB1/HAP3/HAP3A (NUCLEAR FACTOR Y SUBUNIT B1); transcription factor NF-YB CBFD_NFYB_HMF
AT2G38880.3 ATHAP3/ATNF-YB1/HAP3/HAP3A (NUCLEAR FACTOR Y SUBUNIT B1); transcription factor NF-YB CBFD_NFYB_HMF
AT2G38880.4 ATHAP3/ATNF-YB1/HAP3/HAP3A (NUCLEAR FACTOR Y SUBUNIT B1) NF-YB CBFD_NFYB_HMF
AT2G38880.5 ATHAP3/ATNF-YB1/HAP3/HAP3A (NUCLEAR FACTOR Y SUBUNIT B1) NF-YB CBFD_NFYB_HMF
AT2G38880.6 ATHAP3/ATNF-YB1/HAP3/HAP3A (NUCLEAR FACTOR Y SUBUNIT B1) NF-YB CBFD_NFYB_HMF
AT2G47810.1 histone-like transcription factor (CBF/NF-Y) family protein NF-YB CBFD_NFYB_HMF
AT3G05690.1 ATHAP2B/HAP2B/UNE8 (HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 2B); transcription factor CBFB_NFYA
AT3G12480.1 transcription factor, putative NF-YC CBFD_NFYB_HMF
AT3G14020.1 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT3G20670.1 HTA13; DNA binding NF-YC CBFD_NFYB_HMF Histone
AT3G20910.1 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT3G48590.1 HAP5A (Heme activator protein (yeast) homolog 5A); DNA binding / transcription factor NF-YC CBFD_NFYB_HMF Histone
AT3G53340.1 transcription factor NF-YB CBFD_NFYB_HMF
AT4G14540.1 CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family NF-YB CBFD_NFYB_HMF
AT4G27230.1 HTA2 (HISTONE H2A); DNA binding NF-YC CBFD_NFYB_HMF Histone
AT5G06510.1 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT5G06510.2 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT5G06510.3 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CBFB_NFYA
AT5G08190.1 TATA-binding protein-associated phosphoprotein Dr1 protein, putative CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
AT5G08190.2 TATA-binding protein-associated phosphoprotein Dr1 protein, putative CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
AT5G12840.1 HAP2A (EMBRYO DEFECTIVE 2220); transcription factor CBFB_NFYA
AT5G12840.2 HAP2A (EMBRYO DEFECTIVE 2220); transcription factor CBFB_NFYA
AT5G12840.3 HAP2A (EMBRYO DEFECTIVE 2220); transcription factor CBFB_NFYA
AT5G12840.4 HAP2A (EMBRYO DEFECTIVE 2220); transcription factor CBFB_NFYA
AT5G19490.1 DNA binding / sequence-specific DNA binding NF-YC CBFD_NFYB_HMF
AT5G23090.1 TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
AT5G23090.2 TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
AT5G23090.3 TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
AT5G23090.4 TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
AT5G27910.1 CCAAT-box binding transcription factor Hap5a, putative NF-YC CBFD_NFYB_HMF Histone
AT5G38140.1 histone-like transcription factor (CBF/NF-Y) family protein NF-YC CBFD_NFYB_HMF Histone
AT5G43250.1 transcription factor, putative NF-YC CBFD_NFYB_HMF
AT5G47640.1 CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family (Hap3b) NF-YB CBFD_NFYB_HMF
AT5G47670.1 CCAAT-box binding transcription factor family protein / leafy cotyledon 1-related (L1L) NF-YB CBFD_NFYB_HMF
AT5G47670.2 CCAAT-box binding transcription factor family protein / leafy cotyledon 1-related (L1L) NF-YB CBFD_NFYB_HMF
AT5G50470.1 CCAAT-box binding transcription factor Hap5a, putative NF-YC CBFD_NFYB_HMF
AT5G50480.1 CCAAT-box binding transcription factor Hap5a, putative NF-YC CBFD_NFYB_HMF Histone
AT5G50490.1 CCAAT-box binding transcription factor Hap5a, putative NF-YC CBFD_NFYB_HMF Histone
AT5G54640.1 HTA1/RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding NF-YC CBFD_NFYB_HMF Histone
AT5G63470.1 CCAAT-box binding transcription factor Hap5a, putative NF-YC CBFD_NFYB_HMF Histone
AT5G63470.2 CCAAT-box binding transcription factor Hap5a, putative NF-YC CBFD_NFYB_HMF Histone

General references

Bernadt, CT; Nowling, T; Wiebe, MS; Rizzino, A. 2005. NF-Y behaves as a bifunctional transcription factor that can stimulate or repress the FGF-4 promoter in an enhancer-dependent manner. Gene Expr. 12(3):193-212 PUBMEDID:16128003
Li, XY; Mantovani, R; Hooft van Huijsduijnen, R; Andre, I; Benoist, C; Mathis, D. 1992. Evolutionary variation of the CCAAT-binding transcription factor NF-Y. Nucleic Acids Res. 20(5):1087-91 PUBMEDID:1549471

Specific references

Gusmaroli, G; Tonelli, C; Mantovani, R. 2002. Regulation of novel members of the Arabidopsis thaliana CCAAT-binding nuclear factor Y subunits. Gene 283(1-2):41-8 PUBMEDID:11867211