Plant Transcription factor database - Universität Potsdam
version: 3.0

Chlamydomonas reinhardtii CCAAT Family

Description

Bernadt et al. 2005: NF-Y is a bifunctional transcription factor capable of activating or repressing transcription. NF-Y specifically recognizes CCAAT box motifs present in many eukaryotic promoters. The mechanisms involved in regulating its activity are poorly understood.

Members of this family
  SHOULD possess CBFB_NFYA CBFD_NFYB_HMF CCAAT-Dr1 NF-YB NF-YC domains

Domain alignments

This family is also present in:

References

There are 8 gene models in this family



Gene modelDescriptionDomains
111791 e_gwW.7.372.1 NF-YB CBFD_NFYB_HMF
117655 e_gwW.20.153.1 NF-YC CBFD_NFYB_HMF Histone
135809 estExt_gwp_1W.C_130065 NF-YB CBFD_NFYB_HMF
147364 Chlre2_kg.scaffold_19000038 NF-YC CBFD_NFYB_HMF HMG_box
149251 Chlre2_kg.scaffold_28000199 NF-YC AT_hook CBFD_NFYB_HMF
180819 fgenesh2_pg.C_scaffold_111000009 NF-YC Histone
189471 estExt_fgenesh2_pg.C_150166 NF-YC
378904 estExt_fgenesh1_pm.C_chromosome_70258 NF-YB CBFD_NFYB_HMF

General references

Bernadt, CT; Nowling, T; Wiebe, MS; Rizzino, A. 2005. NF-Y behaves as a bifunctional transcription factor that can stimulate or repress the FGF-4 promoter in an enhancer-dependent manner. Gene Expr. 12(3):193-212 PUBMEDID:16128003
Li, XY; Mantovani, R; Hooft van Huijsduijnen, R; Andre, I; Benoist, C; Mathis, D. 1992. Evolutionary variation of the CCAAT-binding transcription factor NF-Y. Nucleic Acids Res. 20(5):1087-91 PUBMEDID:1549471