Plant Transcription factor database - Universität Potsdam
version: 3.0

Selaginella moellendorffii CCAAT Family

Description

Bernadt et al. 2005: NF-Y is a bifunctional transcription factor capable of activating or repressing transcription. NF-Y specifically recognizes CCAAT box motifs present in many eukaryotic promoters. The mechanisms involved in regulating its activity are poorly understood.

Members of this family
  SHOULD possess CBFB_NFYA CBFD_NFYB_HMF CCAAT-Dr1 NF-YB NF-YC domains

Domain alignments

This family is also present in:

References

There are 17 gene models in this family



Gene modelDescriptionDomains
100288 e_gw1.23.497.1 NF-YB CBFD_NFYB_HMF
166626 estExt_Genewise1Plus.C_40592 NF-YC CBFD_NFYB_HMF Histone
170948 estExt_Genewise1Plus.C_130197 NF-YC Histone
19595 gw1.12.282.1 NF-YB CBFD_NFYB_HMF
227538 fgenesh1_kg.C_scaffold_5000038 CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
38104 gw1.0.1477.1 NF-YB CBFD_NFYB_HMF
438143 estExt_fgenesh2_pg.C_20118 CBFB_NFYA
442185 estExt_fgenesh2_pg.C_220160 NF-YB CBFD_NFYB_HMF
58662 gw1.51.449.1 NF-YC CBFD_NFYB_HMF Histone
69246 gw1.13.1025.1 NF-YB CBFD_NFYB_HMF
69579 gw1.12.920.1 NF-YC CBFD_NFYB_HMF Histone
69582 gw1.3.1613.1 NF-YC CBFD_NFYB_HMF
73637 e_gw1.0.964.1 NF-YC CBFD_NFYB_HMF Histone
76653 e_gw1.1.201.1 NF-YC CBFD_NFYB_HMF Histone
7686 gw1.3.131.1 NF-YC CBFD_NFYB_HMF
77573 e_gw1.1.1968.1 NF-YC CBFD_NFYB_HMF Histone
88436 e_gw1.9.98.1 NF-YB CBFD_NFYB_HMF

General references

Bernadt, CT; Nowling, T; Wiebe, MS; Rizzino, A. 2005. NF-Y behaves as a bifunctional transcription factor that can stimulate or repress the FGF-4 promoter in an enhancer-dependent manner. Gene Expr. 12(3):193-212 PUBMEDID:16128003
Li, XY; Mantovani, R; Hooft van Huijsduijnen, R; Andre, I; Benoist, C; Mathis, D. 1992. Evolutionary variation of the CCAAT-binding transcription factor NF-Y. Nucleic Acids Res. 20(5):1087-91 PUBMEDID:1549471