Plant Transcription factor database - Universität Potsdam
version: 3.0

Zea mays CCAAT Family

Description

Bernadt et al. 2005: NF-Y is a bifunctional transcription factor capable of activating or repressing transcription. NF-Y specifically recognizes CCAAT box motifs present in many eukaryotic promoters. The mechanisms involved in regulating its activity are poorly understood.

Members of this family
  SHOULD possess CBFB_NFYA CBFD_NFYB_HMF CCAAT-Dr1 NF-YB NF-YC domains

Domain alignments

This family is also present in:

References

There are 107 gene models in this family



Gene modelDescriptionDomains
AC197054.3_FGP034 CBFB_NFYA
AC199769.5_FGP039 NF-YC CBFD_NFYB_HMF Histone
AC199769.5_FGP040 NF-YC CBFD_NFYB_HMF Histone
AC201832.3_FGP033 NF-YC
AC211408.2_FGP042 CBFB_NFYA
GRMZM2G000686_P01 CBFB_NFYA
GRMZM2G000686_P02 CBFB_NFYA
GRMZM2G000686_P03 CBFB_NFYA
GRMZM2G000686_P04 CBFB_NFYA
GRMZM2G000686_P05 CBFB_NFYA
GRMZM2G000686_P06 CBFB_NFYA
GRMZM2G000686_P08 CBFB_NFYA
GRMZM2G000686_P09 CBFB_NFYA
GRMZM2G000686_P10 CBFB_NFYA
GRMZM2G004133_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G004133_P02 NF-YB CBFD_NFYB_HMF
GRMZM2G004133_P03 NF-YB CBFD_NFYB_HMF
GRMZM2G004133_P04 NF-YB CBFD_NFYB_HMF
GRMZM2G005367_P01 CBFD_NFYB_HMF Histone
GRMZM2G009782_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G009782_P02 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G009782_P03 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G009782_P04 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G011789_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G012654_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G015120_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G015120_P02 NF-YB CBFD_NFYB_HMF
GRMZM2G015120_P04 NF-YB CBFD_NFYB_HMF
GRMZM2G022162_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G023994_P01 CBFB_NFYA
GRMZM2G023994_P02 CBFB_NFYA
GRMZM2G023994_P03 CBFB_NFYA
GRMZM2G033245_P01 CBFB_NFYA
GRMZM2G033245_P02 CBFB_NFYA
GRMZM2G034246_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G035215_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G035215_P02 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G035215_P03 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G038190_P02 NF-YC CBFD_NFYB_HMF
GRMZM2G038190_P03 NF-YC CBFD_NFYB_HMF
GRMZM2G038190_P04 NF-YC CBFD_NFYB_HMF
GRMZM2G038303_P01 CBFB_NFYA
GRMZM2G040349_P01 CBFB_NFYA
GRMZM2G040349_P02 CBFB_NFYA
GRMZM2G041381_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G042047_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G043835_P01 CBFB_NFYA
GRMZM2G046055_P01 NF-YC Histone
GRMZM2G047813_P01 CBFD_NFYB_HMF Histone
GRMZM2G052499_P01 NF-YC
GRMZM2G052774_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G052774_P02 NF-YB CBFD_NFYB_HMF
GRMZM2G052774_P03 NF-YB CBFD_NFYB_HMF
GRMZM2G062594_P01 CBFB_NFYA
GRMZM2G064426_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G064426_P02 NF-YB CBFD_NFYB_HMF
GRMZM2G074773_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G078691_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G082262_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G082262_P02 NF-YB CBFD_NFYB_HMF
GRMZM2G089812_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G091433_P01 NF-YC CBFD_NFYB_HMF
GRMZM2G091433_P03 NF-YC CBFD_NFYB_HMF
GRMZM2G091433_P04 NF-YC CBFD_NFYB_HMF
GRMZM2G091964_P01 CBFB_NFYA
GRMZM2G091964_P02 CBFB_NFYA
GRMZM2G091964_P03 CBFB_NFYA
GRMZM2G096016_P01 CBFB_NFYA
GRMZM2G096016_P02 CBFB_NFYA
GRMZM2G096439_P01 NF-YC Histone
GRMZM2G099066_P02 NF-YC Histone
GRMZM2G099461_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G104396_P01 CBFB_NFYA
GRMZM2G105317_P01 NF-YC CBFD_NFYB_HMF
GRMZM2G105317_P02 NF-YC CBFD_NFYB_HMF
GRMZM2G105317_P03 NF-YC CBFD_NFYB_HMF
GRMZM2G107540_P01 NF-YC Histone
GRMZM2G110210_P01 CBFB_NFYA SWIM
GRMZM2G113127_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G124421_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G124663_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G137340_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G140653_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G140653_P02 NF-YB CBFD_NFYB_HMF
GRMZM2G140653_P03 NF-YB CBFD_NFYB_HMF
GRMZM2G140851_P01 NF-YC CBFD_NFYB_HMF
GRMZM2G140851_P02 NF-YC CBFD_NFYB_HMF
GRMZM2G143895_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G146286_P01 CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
GRMZM2G146286_P02 CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
GRMZM2G146286_P03 CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
GRMZM2G146286_P04 CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
GRMZM2G147712_P01 CCAAT-Dr1 NF-YB CBFD_NFYB_HMF
GRMZM2G151726_P03 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G152034_P01 CBFB_NFYA
GRMZM2G152034_P02 CBFB_NFYA
GRMZM2G152822_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G161680_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G165488_P01 CBFB_NFYA
GRMZM2G165488_P02 CBFB_NFYA
GRMZM2G165488_P03 CBFB_NFYA
GRMZM2G165488_P04 CBFB_NFYA
GRMZM2G167576_P01 NF-YB CBFD_NFYB_HMF Histone
GRMZM2G169884_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G169908_P01 NF-YB CBFD_NFYB_HMF
GRMZM2G174776_P01 NF-YC CBFD_NFYB_HMF Histone
GRMZM2G180947_P01 NF-YB CBFD_NFYB_HMF

General references

Bernadt, CT; Nowling, T; Wiebe, MS; Rizzino, A. 2005. NF-Y behaves as a bifunctional transcription factor that can stimulate or repress the FGF-4 promoter in an enhancer-dependent manner. Gene Expr. 12(3):193-212 PUBMEDID:16128003
Li, XY; Mantovani, R; Hooft van Huijsduijnen, R; Andre, I; Benoist, C; Mathis, D. 1992. Evolutionary variation of the CCAAT-binding transcription factor NF-Y. Nucleic Acids Res. 20(5):1087-91 PUBMEDID:1549471