Plant Transcription factor database - Universität Potsdam
version: 3.0

Arabidopsis lyrata DDT Family

Description

Doerks et al. 2001: Homology-based sequence analyses have revealed the presence of a novel domain (DDT) in bromodomain PHD finger transcription factors (BPTFs), chromatin remodeling factors of the BAZ-family and other putative nuclear proteins. This domain is characterized by a number of conserved aromatic and charged residues and is predicted to consist of three alpha helices. Recent studies indicate a likely DNA-binding function for the DDT domain.

Members of this family
  SHOULD possess DDT domain
  SHOULD NOT possess Alfin-like Homeobox domains

Domain alignments

This family is also present in:

References

There are 4 gene models in this family



Gene modelDescriptionDomains
488087 fgenesh2_kg.6__1221__AT5G12400.1 AT_hook DDT PHD
489125 fgenesh2_kg.6__2259__AT5G22760.1 DDT PHD
905616 scaffold_501320.1 AT_hook DDT PHD
908843 scaffold_600900.1 DDT WAC_Acf1_DNA_bd

General references

Doerks, T; Copley, R; Bork, P. 2001. DDT -- a novel domain in different transcription and chromosome remodeling factors. Trends Biochem. Sci. 26(3):145-6 PUBMEDID:11246006