Plant Transcription factor database - Universität Potsdam
version: 3.0

Selaginella moellendorffii DDT Family

Description

Doerks et al. 2001: Homology-based sequence analyses have revealed the presence of a novel domain (DDT) in bromodomain PHD finger transcription factors (BPTFs), chromatin remodeling factors of the BAZ-family and other putative nuclear proteins. This domain is characterized by a number of conserved aromatic and charged residues and is predicted to consist of three alpha helices. Recent studies indicate a likely DNA-binding function for the DDT domain.

Members of this family
  SHOULD possess DDT domain
  SHOULD NOT possess Alfin-like Homeobox domains

Domain alignments

This family is also present in:

References

There are 5 gene models in this family



Gene modelDescriptionDomains
100168 e_gw1.23.614.1 DDT WAC_Acf1_DNA_bd
107876 e_gw1.35.140.1 DDT
422901 fgenesh2_pg.C_scaffold_59000030 DDT
423936 fgenesh2_pg.C_scaffold_64000076 DDT FAD_binding_3 zf-4CXXC_R1
441144 estExt_fgenesh2_pg.C_140245 AT_hook DDT PHD

General references

Doerks, T; Copley, R; Bork, P. 2001. DDT -- a novel domain in different transcription and chromosome remodeling factors. Trends Biochem. Sci. 26(3):145-6 PUBMEDID:11246006