Plant Transcription factor database - Universität Potsdam
version: 3.0

Carica papaya FAR1 Family

Description

Lin et al. 2007: FHY3 and FAR1 have separable DNA binding and transcriptional activation domains that are highly conserved in Mutator-like transposases. Further, expression of FHY3 and FAR1 is negatively regulated by phyA signaling. We propose that FHY3 and FAR1 represent transcription factors that have been co-opted from an ancient Mutator-like transposase(s) to modulate phyA-signaling homeostasis in higher plants.

Members of this family
  SHOULD possess FAR1 domain

Domain alignments

This family is also present in:

References

There are 25 gene models in this family



Gene modelDescriptionDomains
evm.TU.supercontig_10.62 Aldedh FAR1
evm.TU.supercontig_103.64 FAR1 MULE SWIM
evm.TU.supercontig_107.20 FAR1 MULE SWIM
evm.TU.supercontig_113.2 FAR1 MULE SWIM
evm.TU.supercontig_130.48 FAR1 MULE SWIM
evm.TU.supercontig_151.60 FAR1 MULE SWIM
evm.TU.supercontig_16.53 FAR1 MULE SWIM
evm.TU.supercontig_167.13 FAR1 MULE SWIM
evm.TU.supercontig_167.15 FAR1 MULE SWIM
evm.TU.supercontig_167.18 FAR1 MULE
evm.TU.supercontig_195.38 FAR1
evm.TU.supercontig_20.31 Aldedh FAR1
evm.TU.supercontig_217.15 FAR1 MULE SWIM
evm.TU.supercontig_6.362 FAR1 SWIM
evm.TU.supercontig_60.5 FAR1
evm.TU.supercontig_8.278 FAR1 MULE SWIM
evm.TU.supercontig_8.280 FAR1 MULE SWIM
evm.TU.supercontig_8.49 FAR1
evm.TU.supercontig_8.51 FAR1
evm.TU.supercontig_8.52 FAR1
evm.TU.supercontig_84.88 FAR1 SWIM
evm.TU.supercontig_9.277 FAR1
evm.TU.supercontig_9.280 FAR1
evm.TU.supercontig_9.281 FAR1
evm.TU.supercontig_9.284 FAR1

General references

Hudson, M; Ringli, C; Boylan, MT; Quail, PH. 1999. The FAR1 locus encodes a novel nuclear protein specific to phytochrome A signaling. Genes Dev. 13(15):2017-27 PUBMEDID:10444599
Lin, R; Ding, L; Casola, C; Ripoll, DR; Feschotte, C; Wang, H. 2007. Transposase-derived transcription factors regulate light signaling in Arabidopsis. Science 318(5854):1302-5 PUBMEDID:18033885