Plant Transcription factor database - Universität Potsdam
version: 3.0

Zea mays FAR1 Family

Description

Lin et al. 2007: FHY3 and FAR1 have separable DNA binding and transcriptional activation domains that are highly conserved in Mutator-like transposases. Further, expression of FHY3 and FAR1 is negatively regulated by phyA signaling. We propose that FHY3 and FAR1 represent transcription factors that have been co-opted from an ancient Mutator-like transposase(s) to modulate phyA-signaling homeostasis in higher plants.

Members of this family
  SHOULD possess FAR1 domain

Domain alignments

This family is also present in:

References

There are 40 gene models in this family



Gene modelDescriptionDomains
AC197758.3_FGP030 FAR1
AC204776.3_FGP036 FAR1
GRMZM2G001663_P01 FAR1
GRMZM2G024546_P01 FAR1
GRMZM2G034868_P01 FAR1 MULE SWIM
GRMZM2G034868_P02 FAR1 MULE SWIM
GRMZM2G042842_P01 FAD_binding_1 FAR1 MULE NAD_binding_1 SWIM
GRMZM2G043250_P01 FAR1 MULE SWIM
GRMZM2G048987_P01 FAR1 MULE SWIM
GRMZM2G048987_P02 FAR1 MULE SWIM
GRMZM2G048987_P03 FAR1 MULE SWIM
GRMZM2G054205_P01 FAR1 MULE
GRMZM2G069484_P01 FAR1
GRMZM2G089313_P01 FAR1 MULE SWIM
GRMZM2G098330_P01 FAR1
GRMZM2G104268_P01 FAR1 MULE SWIM
GRMZM2G106616_P01 FAR1 MULE SWIM
GRMZM2G106616_P02 FAR1 MULE SWIM
GRMZM2G106653_P01 FAR1 MULE SWIM
GRMZM2G107153_P01 FAR1 MULE SWIM
GRMZM2G107153_P02 FAR1 MULE SWIM
GRMZM2G114461_P01 FAR1 MULE SWIM
GRMZM2G117108_P01 FAR1 MULE SWIM
GRMZM2G117108_P02 FAR1 MULE SWIM
GRMZM2G127451_P01 FAR1
GRMZM2G129311_P01 FAR1 MULE SWIM
GRMZM2G129311_P02 FAR1 MULE SWIM
GRMZM2G130165_P01 FAR1 MULE SWIM
GRMZM2G135998_P01 FAR1 MULE SWIM
GRMZM2G135998_P03 FAR1 MULE SWIM
GRMZM2G143057_P01 FAR1 MULE SWIM
GRMZM2G148740_P01 FAR1
GRMZM2G148940_P01 FAR1 MULE SWIM
GRMZM2G148940_P02 FAR1 MULE SWIM
GRMZM2G155980_P01 AT_hook FAR1 MULE SWIM
GRMZM2G155980_P02 AT_hook FAR1 MULE SWIM
GRMZM2G163320_P01 AT_hook FAR1 MULE SWIM
GRMZM2G163320_P02 AT_hook FAR1 MULE SWIM
GRMZM2G177413_P01 FAR1 MULE SWIM
GRMZM2G181438_P01 FAR1

General references

Hudson, M; Ringli, C; Boylan, MT; Quail, PH. 1999. The FAR1 locus encodes a novel nuclear protein specific to phytochrome A signaling. Genes Dev. 13(15):2017-27 PUBMEDID:10444599
Lin, R; Ding, L; Casola, C; Ripoll, DR; Feschotte, C; Wang, H. 2007. Transposase-derived transcription factors regulate light signaling in Arabidopsis. Science 318(5854):1302-5 PUBMEDID:18033885