Plant Transcription factor database - Universität Potsdam
version: 3.0

Carica papaya HB Family

Description

Kappen. 2000: The homeodomain is a DNA-binding motif within transcription factor proteins. These transcription factors may be involved in cell differentiation and control of cell growth, as well as patterning of diverse organisms.

Members of this family
  SHOULD possess Homeobox KNOX1 KNOX2 domains

Domain alignments

This family is also present in:

References

There are 63 gene models in this family



Gene modelDescriptionDomains
evm.TU.supercontig_101.25 HALZ HD-ZIP_N Homeobox
evm.TU.supercontig_104.22 Homeobox POX
evm.TU.supercontig_107.24 Homeobox START
evm.TU.supercontig_109.21 Homeobox MEKHLA START
evm.TU.supercontig_115.11 Homeobox
evm.TU.supercontig_1246.1 HALZ Homeobox
evm.TU.supercontig_129.54 HALZ Homeobox
evm.TU.supercontig_1379.1 HALZ Homeobox
evm.TU.supercontig_139.11 Homeobox
evm.TU.supercontig_14.19 HALZ Homeobox
evm.TU.supercontig_144.6 HALZ Homeobox
evm.TU.supercontig_152.55 ELK Homeobox
evm.TU.supercontig_152.56 KNOX1 KNOX2
evm.TU.supercontig_160.21 KNOX1 KNOX2
evm.TU.supercontig_17.180 HALZ Homeobox
evm.TU.supercontig_178.20 Homeobox START
evm.TU.supercontig_178.21 Homeobox START
evm.TU.supercontig_18.209 Homeobox START
evm.TU.supercontig_183.30 HALZ Homeobox
evm.TU.supercontig_187.28 ELK KNOX1 KNOX2
evm.TU.supercontig_19.199 Homeobox
evm.TU.supercontig_190.1 Homeobox
evm.TU.supercontig_195.40 Homeobox POX
evm.TU.supercontig_198.18 Homeobox
evm.TU.supercontig_21.167 Homeobox
evm.TU.supercontig_215.3 HALZ Homeobox
evm.TU.supercontig_254.4 ELK Homeobox KNOX1 KNOX2
evm.TU.supercontig_26.173 Homeobox
evm.TU.supercontig_27.2 DDT Homeobox
evm.TU.supercontig_29.28 ELK KNOX1 KNOX2
evm.TU.supercontig_3.143 HALZ Homeobox
evm.TU.supercontig_3.362 KNOX2 K_trans
evm.TU.supercontig_3.398 Homeobox
evm.TU.supercontig_3143.1 HALZ Homeobox
evm.TU.supercontig_36.176 HALZ Homeobox
evm.TU.supercontig_46.92 ELK KNOX1 KNOX2
evm.TU.supercontig_48.160 ELK Homeobox KNOX1 KNOX2
evm.TU.supercontig_5.102 Homeobox
evm.TU.supercontig_545.3 Homeobox MEKHLA START
evm.TU.supercontig_55.67 HALZ Homeobox
evm.TU.supercontig_56.43 Homeobox POX
evm.TU.supercontig_6.240 Homeobox
evm.TU.supercontig_6.359 Homeobox
evm.TU.supercontig_60.36 Homeobox
evm.TU.supercontig_65.138 HALZ Homeobox
evm.TU.supercontig_65.153 Homeobox
evm.TU.supercontig_69.79 KNOX1
evm.TU.supercontig_69.80 ELK Homeobox
evm.TU.supercontig_7.12 Homeobox
evm.TU.supercontig_7.138 Homeobox START
evm.TU.supercontig_73.3 Homeobox
evm.TU.supercontig_78.13 Homeobox POX
evm.TU.supercontig_8.11 DDT Homeobox
evm.TU.supercontig_8.217 Homeobox START
evm.TU.supercontig_80.1 Homeobox
evm.TU.supercontig_83.102 Homeobox
evm.TU.supercontig_83.97 Homeobox
evm.TU.supercontig_85.57 HALZ Homeobox
evm.TU.supercontig_89.58 HALZ HD-ZIP_N Homeobox
evm.TU.supercontig_9.183 Homeobox
evm.TU.supercontig_90.5 Homeobox START
evm.TU.supercontig_95.13 Homeobox PHD
evm.TU.supercontig_98.2 Homeobox START

General references

Bharathan, G; Janssen, BJ; Kellogg, EA; Sinha, N. 1997. Did homeodomain proteins duplicate before the origin of angiosperms, fungi, and metazoa? Proc. Natl. Acad. Sci. U.S.A. 94(25):13749-53 PUBMEDID:9391098
Chan, RL; Gago, GM; Palena, CM; Gonzalez, DH. 1998. Homeoboxes in plant development. Biochim. Biophys. Acta 1442(1):1-19 PUBMEDID:9767075
Kappen, C. 2000. The homeodomain: an ancient evolutionary motif in animals and plants. Comput. Chem. 24(1):95-103 PUBMEDID:10642882
Scott, MP; Tamkun, JW; Hartzell, GW. 1989. The structure and function of the homeodomain. Biochim. Biophys. Acta 989(1):25-48 PUBMEDID:2568852