Plant Transcription factor database - Universität Potsdam
version: 3.0

Physcomitrella patens HB Family

Description

Kappen. 2000: The homeodomain is a DNA-binding motif within transcription factor proteins. These transcription factors may be involved in cell differentiation and control of cell growth, as well as patterning of diverse organisms.

Members of this family
  SHOULD possess Homeobox KNOX1 KNOX2 domains

Domain alignments

This family is also present in:

References

There are 43 gene models in this family



Gene modelDescriptionDomains
116038 e_gw1.15.340.1 Homeobox MEKHLA START
119971 e_gw1.31.28.1 HALZ Homeobox
120051 e_gw1.31.11.1 HALZ Homeobox
120794 e_gw1.34.11.1 HALZ Homeobox
122672 e_gw1.41.8.1 Homeobox
123042 e_gw1.42.227.1 HALZ Homeobox
125161 e_gw1.53.5.1 Homeobox
127355 e_gw1.65.5.1 HALZ Homeobox
129619 e_gw1.77.85.1 KNOX1 KNOX2
132443 e_gw1.96.4.1 HALZ Homeobox
143445 e_gw1.203.27.1 Homeobox
145866 e_gw1.235.24.1 KNOX1 KNOX2
150953 e_gw1.325.18.1 HALZ Homeobox
154583 e_gw1.431.18.1 HALZ Homeobox
155187 e_gw1.454.11.1 Homeobox
170895 estExt_fgenesh1_pg.C_2670037 Homeobox PHD
173158 estExt_fgenesh1_pg.C_4190017 Homeobox
174493 estExt_gwp_gw1.C_70211 HALZ Homeobox
182184 estExt_gwp_gw1.C_550053 Homeobox MEKHLA START
183629 estExt_gwp_gw1.C_670048 Homeobox MEKHLA START
184087 estExt_gwp_gw1.C_700130 Homeobox MEKHLA START
192868 estExt_gwp_gw1.C_1880070 Homeobox MEKHLA START
233555 estExt_fgenesh2_pg.C_890072 Homeobox
234070 estExt_fgenesh2_pg.C_1150041 Homeobox
234989 estExt_fgenesh2_pm.C_1080004 HALZ Homeobox
59235 fgenesh1_pm.scaffold_154000010 KNOX1 KNOX2
6140 gw1.4.12.1 HALZ Homeobox
6198 gw1.154.2.1 HALZ Homeobox
6570 gw1.65.7.1 HALZ Homeobox
6580 gw1.77.4.1 Homeobox
6648 gw1.34.13.1 HALZ Homeobox
67495 fgenesh1_pg.scaffold_15000027 DDT Homeobox
6992 gw1.28.15.1 Homeobox
71169 fgenesh1_pg.scaffold_31000121 Homeobox
71211 fgenesh1_pg.scaffold_31000163 HALZ Homeobox
7235 gw1.29.10.1 Homeobox
7275 gw1.224.39.1 Homeobox
73588 fgenesh1_pg.scaffold_42000146 HALZ Homeobox
75761 fgenesh1_pg.scaffold_55000024 Homeobox PHD
86211 fgenesh1_pg.scaffold_143000038 HALZ Homeobox
91889 fgenesh1_pg.scaffold_217000007 Homeobox
92125 fgenesh1_pg.scaffold_220000039 Homeobox POX
94284 fgenesh1_pg.scaffold_258000001 Homeobox POX

General references

Bharathan, G; Janssen, BJ; Kellogg, EA; Sinha, N. 1997. Did homeodomain proteins duplicate before the origin of angiosperms, fungi, and metazoa? Proc. Natl. Acad. Sci. U.S.A. 94(25):13749-53 PUBMEDID:9391098
Chan, RL; Gago, GM; Palena, CM; Gonzalez, DH. 1998. Homeoboxes in plant development. Biochim. Biophys. Acta 1442(1):1-19 PUBMEDID:9767075
Kappen, C. 2000. The homeodomain: an ancient evolutionary motif in animals and plants. Comput. Chem. 24(1):95-103 PUBMEDID:10642882
Scott, MP; Tamkun, JW; Hartzell, GW. 1989. The structure and function of the homeodomain. Biochim. Biophys. Acta 989(1):25-48 PUBMEDID:2568852