Plant Transcription factor database - Universität Potsdam
version: 3.0

Zea mays HMG Family

Description

Griess et al. 1993: HMG boxes were initially identified as DNA-binding domains of the human RNA polymerase I (pol I) transcription factor hUBF and the animal high-mobility-group (HMG) protein family HMG1.

Members of this family
  SHOULD possess HMG_box domain
  SHOULD NOT possess ARID YABBY domains

Domain alignments

This family is also present in:

References

There are 33 gene models in this family



Gene modelDescriptionDomains
AC186524.3_FGP037 HMG_box
GRMZM2G013821_P01 HMG_box
GRMZM2G013821_P02 HMG_box
GRMZM2G013821_P03 HMG_box
GRMZM2G024247_P01 HMG_box
GRMZM2G032252_P01 HMG_box Rtt106 SSrecog
GRMZM2G032252_P02 HMG_box Rtt106 SSrecog
GRMZM2G053521_P01 HMG_box Rtt106 SSrecog
GRMZM2G053521_P02 HMG_box Rtt106 SSrecog
GRMZM2G060253_P01 HMG_box
GRMZM2G066528_P01 HMG_box
GRMZM2G066528_P02 HMG_box
GRMZM2G066528_P03 HMG_box
GRMZM2G066528_P04 HMG_box
GRMZM2G066528_P05 HMG_box
GRMZM2G079250_P01 HMG_box Rtt106 SSrecog
GRMZM2G081580_P01 HMG_box
GRMZM2G081580_P03 HMG_box
GRMZM2G081580_P04 HMG_box
GRMZM2G089107_P02 HMG_box Rtt106 SSrecog
GRMZM2G125648_P01 HMG_box
GRMZM2G130182_P01 HMG_box
GRMZM2G130182_P02 HMG_box
GRMZM2G144398_P01 HMG_box
GRMZM2G145968_P01 HMG_box
GRMZM2G145968_P03 HMG_box
GRMZM2G156785_P01 HMG_box
GRMZM2G156785_P02 HMG_box
GRMZM2G156785_P03 HMG_box
GRMZM2G156785_P04 HMG_box
GRMZM2G162284_P01 HMG_box
GRMZM2G162284_P02 HMG_box
GRMZM2G162284_P03 HMG_box

General references

Grasser, KD; Teo, SH; Lee, KB; Broadhurst, RW; Rees, C; Hardman, CH; Thomas, JO. 1998. DNA-binding properties of the tandem HMG boxes of high-mobility-group protein 1 (HMG1). Eur. J. Biochem. 253(3):787-95 PUBMEDID:9654080
Griess, EA; Rensing, SA; Grasser, KD; Maier, UG; Feix, G. 1993. Phylogenetic relationships of HMG box DNA-binding domains. J. Mol. Evol. 37(2):204-10 PUBMEDID:8411210
Wissmüller, S; Kosian, T; Wolf, M; Finzsch, M; Wegner, M. 2006. The high-mobility-group domain of Sox proteins interacts with DNA-binding domains of many transcription factors. Nucleic Acids Res. 34(6):1735-44 PUBMEDID:16582099