Plant Transcription factor database - Universität Potsdam
version: 3.0

Oryza sativa subsp. japonica HSF Family

Description

Wu. 1995: Organisms respond to elevated temperatures and to chemical and physiological stresses by an increase in the synthesis of heat shock proteins. The regulation of heat shock gene expression in eukaryotes is mediated by the conserved heat shock transcription factor (HSF). HSF is present in a latent state under normal conditions; it is activated upon heat stress by induction of trimerization and high-affinity binding to DNA and by exposure of domains for transcriptional activity. Analysis of HSF cDNA clones from many species has defined structural and regulatory regions responsible for the inducible activities. The heat stress signal is thought to be transduced to HSF by changes in the physical environment, in the activity of HSF-modifying enzymes, or by changes in the intracellular level of heat shock proteins.

Members of this family
  SHOULD possess HSF_DNA-bind domain

Domain alignments

This family is also present in:

References

There are 42 gene models in this family



Gene modelDescriptionDomains
LOC_Os01g39020.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os01g43590.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os01g43590.2 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os01g53220.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os01g54550.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os02g13800.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os02g29340.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os02g32590.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os02g32590.2 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os03g06630.1 heat stress transcription factor, putative, expressed HSF_DNA-bind
LOC_Os03g06630.2 heat stress transcription factor, putative, expressed HSF_DNA-bind
LOC_Os03g12370.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os03g12370.2 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os03g12370.3 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os03g12370.4 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os03g25120.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os03g53340.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os03g53340.2 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os03g53340.3 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os03g53340.4 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os03g53340.6 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os03g58160.1 heat stress transcription factor, putative, expressed HSF_DNA-bind
LOC_Os03g58160.2 heat stress transcription factor, putative, expressed HSF_DNA-bind
LOC_Os03g63750.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os04g48030.1 heat stress transcription factor B-1, putative, expressed HSF_DNA-bind
LOC_Os05g45410.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os06g35960.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os06g36930.1 HSF-type DNA-binding domain containing protein HSF_DNA-bind
LOC_Os07g08140.1 heat stress transcription factor, putative, expressed HSF_DNA-bind
LOC_Os07g44690.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os08g36700.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os08g43334.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os08g43334.2 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os09g28200.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os09g28354.1 CPuORF39 - conserved peptide uORF-containing transcript, expressed HSF_DNA-bind
LOC_Os09g35790.1 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os09g35790.2 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os09g35790.3 HSF-type DNA-binding domain containing protein, expressed HSF_DNA-bind
LOC_Os10g28340.1 heat stress transcription factor, putative, expressed HSF_DNA-bind
LOC_Os10g28340.2 heat stress transcription factor, putative, expressed HSF_DNA-bind
LOC_Os10g28340.3 heat stress transcription factor, putative, expressed HSF_DNA-bind
LOC_Os10g28340.5 heat stress transcription factor, putative, expressed HSF_DNA-bind

General references

Baniwal, SK; Bharti, K; Chan, KY; Fauth, M; Ganguli, A; Kotak, S; Mishra, SK; Nover, L; Port, M; Scharf, KD; Tripp, J; Weber, C; Zielinski, D; von Koskull-Döring, P. 2004. Heat stress response in plants: a complex game with chaperones and more than twenty heat stress transcription factors. J. Biosci. 29(4):471-87 PUBMEDID:15625403
Fujita, A; Kikuchi, Y; Kuhara, S; Misumi, Y; Matsumoto, S; Kobayashi, H. 1989. Domains of the SFL1 protein of yeasts are homologous to Myc oncoproteins or yeast heat-shock transcription factor. Gene 85(2):321-8 PUBMEDID:2697640
Nover, L; Scharf, KD; Gagliardi, D; Vergne, P; Czarnecka-Verner, E; Gurley, WB. 1996. The Hsf world: classification and properties of plant heat stress transcription factors. Cell Stress Chaperones 1(4):215-23 PUBMEDID:9222607
Wu, C. 1995. Heat shock transcription factors: structure and regulation. Annu. Rev. Cell Dev. Biol. 11:441-69 PUBMEDID:8689565

Specific references

Liu, JG; Yao, QH; Zhang, Z; Peng, RH; Xiong, AS; Xu, F; Zhu, H. 2005. Isolation and characterization of a cDNA encoding two novel heat-shock factor OsHSF6 and OsHSF12 in Oryza sativa L. J. Biochem. Mol. Biol. 38(5):602-8 PUBMEDID:16202242
Yamanouchi, U; Yano, M; Lin, H; Ashikari, M; Yamada, K. 2002. A rice spotted leaf gene, Spl7, encodes a heat stress transcription factor protein. Proc. Natl. Acad. Sci. U.S.A. 99(11):7530-5 PUBMEDID:12032317