Plant Transcription factor database - Universität Potsdam
version: 3.0

Arabidopsis thaliana NAC Family

Description

Olsen et al. 2005: NAC proteins constitute one of the largest families of plant-specific transcription factors, and the family is present in a wide range of land plants. Here, we summarize the biological and molecular functions of the NAC family, paying particular attention to the intricate regulation of NAC protein level and localization, and to the first indications of NAC participation in transcription factor networks. The recent determination of the DNA and protein binding NAC domain structure offers insight into the molecular functions of the protein family. Research into NAC transcription factors has demonstrated the importance of this protein family in the biology of plants and the need for further studies.

Members of this family
  SHOULD possess NAM domain

Domain alignments

Benchmark against A. thaliana

The Sensitivity and Positive Predictive Value (PPV) were assessed for this family. The data reported by Ooka et al. 2003 for A. thaliana were taken as gold standard.

The gold standard reported 100 members for this family, 100 of which are present in ArabTFDB, giving a PPV of 0.99 and a Senstivity of 1.00.

This family is also present in:

References

There are 126 gene models in this family



Gene modelDescriptionDomains
AT1G01010.1 ANAC001 (Arabidopsis NAC domain containing protein 1); transcription factor NAM
AT1G01720.1 ATAF1 (Arabidopsis NAC domain containing protein 2); transcription factor NAM
AT1G02220.1 ANAC003 (Arabidopsis NAC domain containing protein 3); transcription factor NAM
AT1G02230.1 ANAC004 (Arabidopsis NAC domain containing protein 4); transcription factor NAM
AT1G02250.1 ANAC005 (Arabidopsis NAC domain containing protein 5); transcription factor NAM
AT1G03490.1 ANAC006 (Arabidopsis NAC domain containing protein 6); transcription factor NAM
AT1G12260.1 VND4 (VASCULAR RELATED NAC-DOMAIN PROTEIN 4); transcription factor NAM
AT1G25580.1 ANAC008 (Arabidopsis NAC domain containing protein 8); transcription factor NAM
AT1G26870.1 ANAC009 (Arabidopsis NAC domain containing protein 9); transcription factor NAM
AT1G28470.1 ANAC010 (Arabidopsis NAC domain containing protein 10); transcription factor NAM
AT1G32510.1 ANAC011 (Arabidopsis NAC domain containing protein 11); transcription factor NAM
AT1G32770.1 ANAC012/NST3/SND1 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 12); specific transcriptional repressor/ transcription activator/ transcription factor NAM
AT1G32870.1 ANAC013 (Arabidopsis NAC domain containing protein 13); transcription factor NAM
AT1G32870.2 ANAC013 (Arabidopsis NAC domain containing protein 13) NAM
AT1G33060.1 ANAC014; transcription factor NAM
AT1G33060.2 ANAC014 NAM
AT1G33280.1 ANAC015 (Arabidopsis NAC domain containing protein 15); transcription factor NAM
AT1G34180.1 ANAC016 (Arabidopsis NAC domain containing protein 16); transcription factor NAM
AT1G34180.2 ANAC016 (Arabidopsis NAC domain containing protein 16) NAM
AT1G34190.1 ANAC017 (Arabidopsis NAC domain containing protein 17); transcription factor NAM
AT1G52880.1 NAM (Arabidopsis NAC domain containing protein 18); transcription factor NAM
AT1G52890.1 ANAC019 (Arabidopsis NAC domain containing protein 19); transcription factor NAM
AT1G54330.1 ANAC020 (Arabidopsis NAC domain containing protein 20); transcription factor NAM
AT1G56010.1 NAC1 (Arabidopsis NAC domain containing protein 21, Arabidopsis NAC domain containing protein 22); transcription factor NAM
AT1G56010.2 NAC1 (Arabidopsis NAC domain containing protein 21, Arabidopsis NAC domain containing protein 22); transcription factor NAM
AT1G60280.1 ANAC023 (Arabidopsis NAC domain containing protein 23); transcription factor NAM
AT1G60350.1 ANAC024 (Arabidopsis NAC domain containing protein 24); transcription factor NAM
AT1G61110.1 ANAC025 (Arabidopsis NAC domain containing protein 25); transcription factor NAM
AT1G62700.1 VND5 (VASCULAR RELATED NAC-DOMAIN PROTEIN 5); transcription factor NAM
AT1G64100.2 pentatricopeptide (PPR) repeat-containing protein NAM PPR
AT1G64105.1 ANAC027 (Arabidopsis NAC domain containing protein 27); transcription factor NAM
AT1G65910.1 ANAC028 (Arabidopsis NAC domain containing protein 28); transcription factor NAM
AT1G69490.1 NAP (NAC-LIKE, ACTIVATED BY AP3/PI); transcription factor NAM
AT1G71930.1 VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7); transcription factor NAM
AT1G76420.1 CUC3 (CUP SHAPED COTYLEDON3); transcription factor NAM
AT1G77450.1 ANAC032 (Arabidopsis NAC domain containing protein 32); transcription factor NAM
AT1G79580.1 ANAC033; transcription factor NAM
AT1G79580.2 ANAC033 NAM
AT1G79580.3 ANAC033 NAM
AT2G02450.1 ANAC034/ANAC035 (Arabidopsis NAC domain containing protein 34, Arabidopsis NAC domain containing protein 35); transcription factor NAM
AT2G02450.2 ANAC034/ANAC035 (Arabidopsis NAC domain containing protein 34, Arabidopsis NAC domain containing protein 35); transcription factor NAM
AT2G17040.1 ANAC036 (Arabidopsis NAC domain containing protein 36); transcription factor NAM
AT2G18060.1 VND1 (VASCULAR RELATED NAC-DOMAIN PROTEIN 1); transcription factor NAM
AT2G24430.1 ANAC038/ANAC039; transcription factor NAM
AT2G24430.2 ANAC038/ANAC039; transcription factor NAM
AT2G27300.1 ANAC040/NTL8 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 40); transcription factor NAM
AT2G33480.1 ANAC041 (Arabidopsis NAC domain containing protein 41); transcription factor NAM
AT2G33480.2 ANAC041 (Arabidopsis NAC domain containing protein 41) NAM
AT2G43000.1 ANAC042 (Arabidopsis NAC domain containing protein 42); transcription factor NAM
AT2G46770.1 NST1 (NAC SECONDARY WALL THICKENING PROMOTING FACTOR1); transcription factor NAM
AT3G01600.1 ANAC044 (Arabidopsis NAC domain containing protein 44); transcription factor NAM
AT3G03200.1 ANAC045 (Arabidopsis NAC domain containing protein 45); transcription factor NAM
AT3G04060.1 ANAC046 (Arabidopsis NAC domain containing protein 46); transcription factor NAM
AT3G04070.1 ANAC047 (Arabidopsis NAC domain containing protein 47); transcription factor NAM
AT3G04070.2 ANAC047 (Arabidopsis NAC domain containing protein 47) NAM
AT3G04420.1 ANAC048 (Arabidopsis NAC domain containing protein 48); transcription factor NAM
AT3G04420.2 ANAC048 (Arabidopsis NAC domain containing protein 48) NAM
AT3G04430.1 ANAC049 (Arabidopsis NAC domain containing protein 49); transcription factor NAM
AT3G10480.1 ANAC050; transcription factor NAM
AT3G10480.2 ANAC050 NAM
AT3G10490.1 ANAC051/ANAC052 (Arabidopsis NAC domain containing protein 51, Arabidopsis NAC domain containing protein 52); transcription factor NAM
AT3G10490.2 ANAC051/ANAC052 (Arabidopsis NAC domain containing protein 51, Arabidopsis NAC domain containing protein 52); transcription factor NAM
AT3G10500.1 ANAC053 (Arabidopsis NAC domain containing protein 53); transcription factor NAM
AT3G12910.1 transcription factor NAM
AT3G12977.1 DNA binding NAM
AT3G15170.1 CUC1 (CUP-SHAPED COTYLEDON1); transcription factor NAM
AT3G15500.1 ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55); transcription factor NAM
AT3G15510.1 ATNAC2 (Arabidopsis thaliana NAC domain containing protein 2); transcription factor NAM
AT3G17730.1 ANAC057 (Arabidopsis NAC domain containing protein 57); transcription factor NAM
AT3G18400.1 ANAC058 (Arabidopsis NAC domain containing protein 58); transcription factor NAM
AT3G29035.1 ANAC059/ATNAC3 (Arabidopsis NAC domain containing protein 59); protein heterodimerization/ transcription factor NAM
AT3G44290.1 ANAC060 (Arabidopsis NAC domain containing protein 60); transcription factor NAM
AT3G44350.1 ANAC061 (Arabidopsis NAC domain containing protein 61); transcription factor NAM
AT3G44350.2 ANAC061 (Arabidopsis NAC domain containing protein 61) NAM
AT3G49530.1 ANAC062 (Arabidopsis NAC domain containing protein 62); transcription factor NAM
AT3G55210.1 ANAC063 (Arabidopsis NAC domain containing protein 63); transcription factor NAM
AT3G56530.1 ANAC064 (Arabidopsis NAC domain containing protein 64); transcription factor NAM
AT3G56560.1 ANAC065 (Arabidopsis NAC domain containing protein 65); transcription factor NAM
AT3G61910.1 NST2 (NAC SECONDARY WALL THICKENING PROMOTING FACTOR2); transcription factor NAM
AT4G01520.1 ANAC067 (Arabidopsis NAC domain containing protein 67); transcription factor NAM
AT4G01540.1 ANAC068/NTM1 (NAC WITH TRANSMEMBRANE MOTIF1); transcription activator/ transcription factor NAM
AT4G01540.2 ANAC068/NTM1 (NAC WITH TRANSMEMBRANE MOTIF1) NAM
AT4G01550.1 ANAC069 (Arabidopsis NAC domain containing protein 69); transcription factor NAM
AT4G10350.1 ANAC070 (Arabidopsis NAC domain containing protein 70); transcription factor NAM
AT4G17980.1 ANAC071 (Arabidopsis NAC domain containing protein 71); transcription factor NAM
AT4G27410.2 RD26 (RESPONSIVE TO DESSICATION 26); transcription factor NAM
AT4G27410.3 RD26 (RESPONSIVE TO DESSICATION 26) NAM
AT4G28500.1 ANAC073 (Arabidopsis NAC domain containing protein 73); transcription factor NAM
AT4G28530.1 ANAC074 (Arabidopsis NAC domain containing protein 74); transcription factor NAM
AT4G28530.2 ANAC074 (Arabidopsis NAC domain containing protein 74) NAM
AT4G29230.1 ANAC075 (Arabidopsis NAC domain containing protein 75); transcription factor NAM
AT4G35580.1 no apical meristem (NAM) family protein NAM
AT4G35580.2 no apical meristem (NAM) family protein NAM
AT4G36160.1 ANAC076/VND2 (VASCULAR-RELATED NAC-DOMAIN 2); transcription factor NAM
AT5G04400.1 ANAC077 (Arabidopsis NAC domain containing protein 77); DNA binding NAM
AT5G04410.1 NAC2 (Arabidopsis NAC domain containing protein 78); transcription factor NAM
AT5G07680.1 ANAC079/ANAC080/ATNAC4 (Arabidopsis NAC domain containing protein 79, Arabidopsis NAC domain containing protein 80); transcription factor NAM
AT5G07680.2 ANAC079/ANAC080/ATNAC4 (Arabidopsis NAC domain containing protein 79, Arabidopsis NAC domain containing protein 80); transcription factor NAM
AT5G08790.1 ATAF2 (Arabidopsis NAC domain containing protein 81) NAM
AT5G09330.1 ANAC082 (Arabidopsis NAC domain containing protein 82); transcription factor NAM
AT5G09330.2 ANAC082 (Arabidopsis NAC domain containing protein 82) NAM
AT5G09330.3 ANAC082 (Arabidopsis NAC domain containing protein 82) NAM
AT5G13180.1 ANAC083 (Arabidopsis NAC domain containing protein 83); transcription factor NAM
AT5G14000.1 ANAC084 (Arabidopsis NAC domain containing protein 84); transcription factor NAM
AT5G14490.1 ANAC085 (Arabidopsis NAC domain containing protein 85); transcription factor NAM
AT5G17260.1 ANAC086 (Arabidopsis NAC domain containing protein 86); transcription factor NAM
AT5G18270.1 ANAC087; transcription factor NAM
AT5G18270.2 ANAC087 NAM
AT5G18300.1 ANAC088 (Arabidopsis NAC domain containing protein 88); transcription factor NAM
AT5G22290.1 ANAC089 (Arabidopsis NAC domain containing protein 89); transcription factor NAM
AT5G22380.1 ANAC090 (Arabidopsis NAC domain containing protein 90); transcription factor NAM
AT5G24590.2 ANAC091/TIP (TCV-INTERACTING PROTEIN); transcription coactivator/ transcription factor NAM
AT5G39610.1 ANAC092/ATNAC2/ATNAC6 (Arabidopsis NAC domain containing protein 92); protein heterodimerization/ protein homodimerization/ transcription factor NAM
AT5G39690.1 ANAC093 (Arabidopsis NAC domain containing protein 93); transcription factor NAM
AT5G39820.1 ANAC094 (Arabidopsis NAC domain containing protein 94); transcription factor NAM
AT5G41090.1 ANAC095 (Arabidopsis NAC domain containing protein 95); transcription factor NAM
AT5G46590.1 ANAC096 (Arabidopsis NAC domain containing protein 96); transcription factor NAM
AT5G50820.1 ANAC097 (Arabidopsis NAC domain containing protein 97); transcription factor NAM
AT5G53950.1 CUC2 (CUP-SHAPED COTYLEDON 2); transcription factor NAM
AT5G56620.1 ANAC099 (Arabidopsis NAC domain containing protein 99); transcription factor NAM
AT5G61430.1 ANAC100/ATNAC5 (Arabidopsis NAC domain containing protein 100); transcription factor NAM
AT5G62380.1 VND6 (VASCULAR-RELATED NAC-DOMAIN 6); transcription factor NAM
AT5G63790.1 ANAC102 (Arabidopsis NAC domain containing protein 102); transcription factor NAM
AT5G64060.1 ANAC103 (Arabidopsis NAC domain containing protein 103); transcription factor NAM
AT5G64530.1 ANAC104/XND1 (Arabidopsis NAC domain containing protein 104); transcription factor NAM
AT5G66300.1 ANAC105/VND3 (VASCULAR-RELATED NAC-DOMAIN 3); transcription factor NAM

General references

Olsen, AN; Ernst, HA; Leggio, LL; Skriver, K. 2005. NAC transcription factors: structurally distinct, functionally diverse. Trends Plant Sci. 10(2):79-87 PUBMEDID:15708345

Specific references

Ooka, H; Satoh, K; Doi, K; Nagata, T; Otomo, Y; Murakami, K; Matsubara, K; Osato, N; Kawai, J; Carninci, P; Hayashizaki, Y; Suzuki, K; Kojima, K; Takahara, Y; Yamamoto, K; Kikuchi, S. 2003. Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DNA Res. 10(6):239-47 PUBMEDID:15029955
Xie, Q; Frugis, G; Colgan, D; Chua, NH. 2000. Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development. Genes Dev. 14(23):3024-36 PUBMEDID:11114891