Plant Transcription factor database - Universität Potsdam
version: 3.0

Selaginella moellendorffii NAC Family

Description

Olsen et al. 2005: NAC proteins constitute one of the largest families of plant-specific transcription factors, and the family is present in a wide range of land plants. Here, we summarize the biological and molecular functions of the NAC family, paying particular attention to the intricate regulation of NAC protein level and localization, and to the first indications of NAC participation in transcription factor networks. The recent determination of the DNA and protein binding NAC domain structure offers insight into the molecular functions of the protein family. Research into NAC transcription factors has demonstrated the importance of this protein family in the biology of plants and the need for further studies.

Members of this family
  SHOULD possess NAM domain

Domain alignments

Benchmark against A. thaliana

The Sensitivity and Positive Predictive Value (PPV) were assessed for this family. The data reported by Ooka et al. 2003 for A. thaliana were taken as gold standard.

The gold standard reported 100 members for this family, 100 of which are present in ArabTFDB, giving a PPV of 0.99 and a Senstivity of 1.00.

This family is also present in:

References

There are 20 gene models in this family



Gene modelDescriptionDomains
104940 e_gw1.30.218.1 NAM
105213 e_gw1.30.230.1 NAM
147012 estExt_Genewise1.C_140258 NAM
25673 gw1.0.747.1 NAM
36139 gw1.32.241.1 NAM
47266 gw1.114.167.1 NAM
67638 gw1.10.1032.1 NAM
67677 gw1.16.759.1 NAM
68150 gw1.1.1844.1 NAM
69131 gw1.1.1921.1 NAM
71303 gw1.0.2552.1 NAM
71305 gw1.1.2023.1 NAM
71307 gw1.0.2553.1 NAM
71404 gw1.24.743.1 NAM
71417 gw1.1.2026.1 NAM
71469 gw1.14.1002.1 NAM
74001 e_gw1.0.2658.1 NAM
74950 e_gw1.0.2596.1 NAM
77371 e_gw1.1.522.1 NAM
89986 e_gw1.10.1011.1 NAM

General references

Olsen, AN; Ernst, HA; Leggio, LL; Skriver, K. 2005. NAC transcription factors: structurally distinct, functionally diverse. Trends Plant Sci. 10(2):79-87 PUBMEDID:15708345