Plant Transcription factor database - Universität Potsdam
version: 3.0

Vitis vinifera SET Family

Description

Marmorstein. 2003: The methylation of lysine residues on histone tails is catalyzed by proteins containing a conserved SET domain. A recent flurry of structures of SET domain proteins has revealed a new protein fold and a scaffold for understanding catalysis and substrate binding by these enzymes. The prospect that histone methylation might form an epigenetic code and the implicated involvement of SET domain proteins in cancer assures that structure-function studies of these enzymes will continue until their detailed mechanism of action is determined.

Members of this family
  SHOULD possess SET domain
  SHOULD NOT possess CXC PHD zf-C2H2 domains

Domain alignments

This family is also present in:

References

There are 32 gene models in this family



Gene modelDescriptionDomains
GSVIVP00003639001 SET
GSVIVP00003847001 Pre-SET SET
GSVIVP00005935001 Rubis-subs-bind SET
GSVIVP00006194001 Pre-SET SET YDG_SRA
GSVIVP00013493001 Pre-SET SET YDG_SRA
GSVIVP00013886001 SET
GSVIVP00014173001 Pre-SET SET YDG_SRA
GSVIVP00014209001 Pre-SET SET YDG_SRA
GSVIVP00015453001 SET zf-CW
GSVIVP00017128001 SET
GSVIVP00019523001 SET
GSVIVP00020336001 Pre-SET SET
GSVIVP00020373001 Pre-SET SET YDG_SRA
GSVIVP00020556001 Rubis-subs-bind SET
GSVIVP00023351001 Pre-SET SET YDG_SRA
GSVIVP00023493001 SET
GSVIVP00025025001 Pre-SET SET
GSVIVP00026090001 SET
GSVIVP00026746001 SET
GSVIVP00028115001 SET
GSVIVP00028515001 Pre-SET SET WIYLD
GSVIVP00029072001 Rubis-subs-bind SET
GSVIVP00029499001 SET
GSVIVP00030097001 SET
GSVIVP00030583001 SET
GSVIVP00031366001 SET
GSVIVP00031726001 SET
GSVIVP00031728001 SET
GSVIVP00032732001 SET
GSVIVP00032836001 Pre-SET SET
GSVIVP00033960001 Pre-SET SET YDG_SRA
GSVIVP00037955001 SET

General references

Marmorstein, R. 2003. Structure of SET domain proteins: a new twist on histone methylation. Trends Biochem. Sci. 28(2):59-62 PUBMEDID:12575990