Plant Transcription factor database - Universität Potsdam
version: 3.0

Zea mays SET Family

Description

Marmorstein. 2003: The methylation of lysine residues on histone tails is catalyzed by proteins containing a conserved SET domain. A recent flurry of structures of SET domain proteins has revealed a new protein fold and a scaffold for understanding catalysis and substrate binding by these enzymes. The prospect that histone methylation might form an epigenetic code and the implicated involvement of SET domain proteins in cancer assures that structure-function studies of these enzymes will continue until their detailed mechanism of action is determined.

Members of this family
  SHOULD possess SET domain
  SHOULD NOT possess CXC PHD zf-C2H2 domains

Domain alignments

This family is also present in:

References

There are 100 gene models in this family



Gene modelDescriptionDomains
GRMZM2G000408_P01 SET WIYLD
GRMZM2G001103_P01 Pre-SET SET YDG_SRA
GRMZM2G001103_P02 Pre-SET SET YDG_SRA
GRMZM2G008654_P01 SET WIYLD
GRMZM2G016901_P01 Pre-SET SET WIYLD
GRMZM2G020343_P01 SET
GRMZM2G021044_P01 Pre-SET SET YDG_SRA
GRMZM2G021044_P02 Pre-SET SET YDG_SRA
GRMZM2G024477_P01 SET
GRMZM2G024477_P02 SET
GRMZM2G025924_P01 Pre-SET SET YDG_SRA
GRMZM2G031407_P01 Pre-SET SET YDG_SRA
GRMZM2G033694_P01 SET
GRMZM2G033694_P02 SET
GRMZM2G033694_P03 SET
GRMZM2G034288_P01 Pre-SET SET YDG_SRA
GRMZM2G034288_P02 SET
GRMZM2G043484_P01 SET
GRMZM2G043484_P02 SET
GRMZM2G045507_P01 SET
GRMZM2G047695_P01 Rubis-subs-bind SET
GRMZM2G051707_P01 SET zf-CW
GRMZM2G051707_P02 SET
GRMZM2G054380_P01 SET
GRMZM2G054380_P02 SET
GRMZM2G054380_P03 SET
GRMZM2G054380_P04 Pre-SET SET YDG_SRA
GRMZM2G055381_P01 Rubis-subs-bind SET
GRMZM2G057692_P01 Pre-SET SET
GRMZM2G057692_P02 Pre-SET SET
GRMZM2G057692_P03 Pre-SET SET WIYLD
GRMZM2G058700_P01 SET
GRMZM2G058700_P02 SET
GRMZM2G058700_P03 Rubis-subs-bind SET
GRMZM2G060478_P01 AT_hook Pre-SET SET YDG_SRA
GRMZM2G061059_P01 SET WIYLD
GRMZM2G061709_P01 Pre-SET SET WIYLD
GRMZM2G063030_P01 SET
GRMZM2G063030_P02 SET
GRMZM2G063316_P01 Rubis-subs-bind SET
GRMZM2G067746_P01 SET zf-CW
GRMZM2G071957_P01 SET
GRMZM2G071957_P02 SET
GRMZM2G072440_P02 SET
GRMZM2G072440_P03 SET
GRMZM2G072440_P04 SET
GRMZM2G074094_P01 Pre-SET SET YDG_SRA
GRMZM2G074094_P02 Pre-SET SET
GRMZM2G074094_P03 Pre-SET SET YDG_SRA
GRMZM2G075600_P01 SET
GRMZM2G077258_P01 SET
GRMZM2G077258_P02 SET
GRMZM2G077258_P03 Rubis-subs-bind SET
GRMZM2G078458_P01 SET
GRMZM2G078458_P02 SET
GRMZM2G078458_P03 SET
GRMZM2G078835_P01 SET
GRMZM2G078835_P02 Pre-SET SET YDG_SRA
GRMZM2G084996_P01 SET
GRMZM2G084996_P02 SET
GRMZM2G092131_P01 SET
GRMZM2G092759_P04 SET
GRMZM2G098418_P01 Pre-SET SET YDG_SRA
GRMZM2G098418_P02 SET
GRMZM2G098418_P03 SET
GRMZM2G098418_P04 SET
GRMZM2G102875_P01 Pre-SET SET YDG_SRA
GRMZM2G105869_P02 Pre-SET SET
GRMZM2G108536_P01 SET
GRMZM2G108536_P02 SET
GRMZM2G112145_P01 Pre-SET SET YDG_SRA
GRMZM2G117458_P01 Pre-SET SET YDG_SRA
GRMZM2G117458_P02 Pre-SET SET YDG_SRA
GRMZM2G117458_P03 Pre-SET SET YDG_SRA
GRMZM2G117933_P01 Pre-SET SET YDG_SRA
GRMZM2G118956_P01 Rubis-subs-bind SET
GRMZM2G124729_P01 Pre-SET SET YDG_SRA
GRMZM2G124729_P02 Pre-SET SET YDG_SRA
GRMZM2G125432_P01 Pre-SET SET
GRMZM2G125432_P02 Pre-SET SET
GRMZM2G137866_P01 SET
GRMZM2G137866_P02 SET
GRMZM2G137866_P03 SET
GRMZM2G138115_P01 Pre-SET SET WIYLD
GRMZM2G139710_P01 Pre-SET SET YDG_SRA
GRMZM2G139710_P02 Pre-SET SET YDG_SRA
GRMZM2G140577_P01 Pre-SET SET YDG_SRA
GRMZM2G142634_P01 Rubis-subs-bind SET
GRMZM2G147619_P01 SET
GRMZM2G147619_P02 SET
GRMZM2G147619_P03 SET
GRMZM2G147619_P04 SET
GRMZM2G149153_P01 F-box SET
GRMZM2G153229_P01 Pre-SET SET
GRMZM2G153229_P02 Pre-SET SET
GRMZM2G160662_P01 Pre-SET SET YDG_SRA
GRMZM2G160662_P02 Pre-SET SET YDG_SRA
GRMZM2G165011_P01 Pre-SET SET YDG_SRA
GRMZM2G172427_P01 Pre-SET SET
GRMZM2G172828_P01 SET

General references

Marmorstein, R. 2003. Structure of SET domain proteins: a new twist on histone methylation. Trends Biochem. Sci. 28(2):59-62 PUBMEDID:12575990