Plant Transcription factor database - Universität Potsdam
version: 3.0

Arabidopsis thaliana bZIP Family

Description

Jakoby et al. 2002: In plants, basic region/leucine zipper motif (bZIP) transcription factors regulate processes including pathogen defence, light and stress signalling, seed maturation and flower development.

Members of this family
  SHOULD possess bZIP_1 bZIP_2 bZIP_Maf domains
  SHOULD NOT possess HLH domain

Domain alignments

Benchmark against A. thaliana

The Sensitivity and Positive Predictive Value (PPV) were assessed for this family. The data reported by Jakoby et al. 2002 for A. thaliana were taken as gold standard.

The gold standard reported 74 members for this family, 68 of which are present in ArabTFDB, giving a PPV of 0.97. Six additional members not present in ArabTFDB might be false negatives, giving a Sensitivity of 0.92.

This family is also present in:

References

There are 111 gene models in this family



Gene modelDescriptionDomains
AT1G03970.1 GBF4 (G-box binding factor 4); transcription factor bZIP_1 bZIP_2
AT1G06070.1 bZIP transcription factor, putative (bZIP69) bZIP_1 bZIP_2
AT1G06850.1 ATBZIP52 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 52); DNA binding / transcription factor bZIP_1 bZIP_2
AT1G06850.2 ATBZIP52 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 52); DNA binding bZIP_1 bZIP_2
AT1G08320.1 bZIP family transcription factor bZIP_2
AT1G08320.2 bZIP family transcription factor bZIP_2
AT1G08320.3 bZIP family transcription factor bZIP_2
AT1G13600.1 ATBZIP58 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 58); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factor bZIP_1 bZIP_2
AT1G19490.1 bZIP transcription factor family protein bZIP_1
AT1G32150.1 bZIP transcription factor family protein MFMR bZIP_1 bZIP_2
AT1G42990.1 ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60); DNA binding / transcription factor bZIP_1 bZIP_2
AT1G43700.1 VIP1 (VIRE2-INTERACTING PROTEIN 1); transcription factor bZIP_1 bZIP_2
AT1G45249.1 ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2) bZIP_1 bZIP_2
AT1G49720.1 ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor bZIP_1 bZIP_2
AT1G59530.1 ATBZIP4 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER); DNA binding / transcription factor bZIP_1 bZIP_2
AT1G68640.1 PAN (PERIANTHIA); DNA binding / transcription factor bZIP_2
AT1G68880.1 ATBZIP (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 8); DNA binding / transcription factor bZIP_1 bZIP_2
AT1G75390.1 ATBZIP44 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 44); DNA binding / protein heterodimerization/ transcription factor bZIP_1 bZIP_2
AT1G75390.2 ATBZIP44 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 44) bZIP_1 bZIP_2
AT1G77920.1 bZIP family transcription factor bZIP_1 bZIP_2
AT2G04038.1 ATBZIP48 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 48); DNA binding / transcription factor bZIP_1 bZIP_2
AT2G12900.1 DNA binding / transcription factor bZIP_2
AT2G12940.1 UNE4 (unfertilized embryo sac 4); transcription factor bZIP_2
AT2G13150.1 transcription factor bZIP_2
AT2G16770.1 DNA binding / transcription factor bZIP_2
AT2G18160.1 ATBZIP2/GBF5 (G-BOX BINDING FACTOR 5); DNA binding / protein heterodimerization/ transcription factor bZIP_1 bZIP_2
AT2G21230.1 bZIP family transcription factor bZIP_1 bZIP_2
AT2G21230.2 bZIP family transcription factor bZIP_1 bZIP_2
AT2G21230.3 bZIP family transcription factor bZIP_1 bZIP_2
AT2G21235.1 bZIP protein-related bZIP_2
AT2G22850.1 ATBZIP6 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 6); DNA binding / transcription factor bZIP_1 bZIP_2
AT2G31370.1 bZIP transcription factor (POSF21) bZIP_1 bZIP_2
AT2G31370.2 bZIP transcription factor (POSF21) bZIP_1 bZIP_2
AT2G31370.3 bZIP transcription factor (POSF21) bZIP_1 bZIP_2
AT2G31370.4 bZIP transcription factor (POSF21) bZIP_1 bZIP_2
AT2G31370.5 bZIP transcription factor (POSF21) bZIP_1 bZIP_2
AT2G35530.1 bZIP transcription factor family protein MFMR bZIP_1 bZIP_2
AT2G36270.1 ABI5 (ABA INSENSITIVE 5); DNA binding / transcription activator/ transcription factor bZIP_1 bZIP_2
AT2G40620.1 bZIP transcription factor family protein bZIP_1 bZIP_2
AT2G40950.1 BZIP17; DNA binding / transcription activator/ transcription factor bZIP_1 bZIP_2
AT2G41070.1 EEL (ENHANCED EM LEVEL); DNA binding / transcription factor bZIP_1 bZIP_2
AT2G41070.2 EEL (ENHANCED EM LEVEL); DNA binding / transcription factor bZIP_1 bZIP_2
AT2G41070.3 EEL (ENHANCED EM LEVEL); DNA binding / transcription factor bZIP_1 bZIP_2
AT2G42380.1 bZIP transcription factor family protein bZIP_2
AT2G42380.2 bZIP transcription factor family protein bZIP_1 bZIP_2
AT2G46270.1 GBF3 (G-BOX BINDING FACTOR 3); transcription factor MFMR bZIP_1 bZIP_2
AT2G46270.2 GBF3 (G-BOX BINDING FACTOR 3); transcription factor MFMR bZIP_1 bZIP_2
AT3G10800.1 BZIP28; DNA binding / transcription factor bZIP_1 bZIP_2
AT3G12250.1 TGA6 (TGA1a-related gene 6); DNA binding / transcription factor bZIP_2
AT3G12250.2 TGA6 (TGA1a-related gene 6); DNA binding / transcription factor bZIP_2
AT3G12250.3 TGA6 (TGA1a-related gene 6); DNA binding / transcription factor bZIP_2
AT3G12250.4 TGA6 (TGA1a-related gene 6); DNA binding / transcription factor bZIP_2
AT3G12250.5 TGA6 (TGA1a-related gene 6) bZIP_2
AT3G17609.1 HYH (HY5-HOMOLOG); DNA binding / transcription factor bZIP_1 bZIP_2
AT3G17609.2 HYH (HY5-HOMOLOG); DNA binding / transcription factor bZIP_1 bZIP_2
AT3G17609.3 HYH (HY5-HOMOLOG); DNA binding / transcription factor bZIP_1 bZIP_2
AT3G17609.4 HYH (HY5-HOMOLOG) bZIP_1 bZIP_2
AT3G19290.1 ABF4 (ABRE BINDING FACTOR 4); DNA binding / transcription activator/ transcription factor bZIP_1 bZIP_2
AT3G30530.1 ATBZIP42 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factor bZIP_1 bZIP_2
AT3G44460.1 DPBF2 (BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 67); DNA binding / transcription factor bZIP_1 bZIP_2
AT3G49760.1 ATBZIP5 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 5); DNA binding / transcription factor bZIP_1 bZIP_2
AT3G51960.1 bZIP family transcription factor bZIP_2
AT3G51960.2 bZIP family transcription factor bZIP_2
AT3G54620.1 ATBZIP25/BZO2H4 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 25); protein heterodimerization/ transcription factor bZIP_1 bZIP_2
AT3G54620.2 ATBZIP25/BZO2H4 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 25) bZIP_1
AT3G56660.1 BZIP49; DNA binding / transcription factor bZIP_1 bZIP_2
AT3G56850.1 AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3); DNA binding / transcription activator/ transcription factor bZIP_1 bZIP_2
AT3G58120.1 bZIP transcription factor family protein bZIP_1 bZIP_2
AT3G62420.1 ATBZIP53 (BASIC REGION/LEUCINE ZIPPER MOTIF 53); DNA binding / protein heterodimerization/ sequence-specific DNA binding / transcription factor bZIP_1 bZIP_2
AT4G01120.1 GBF2 (G-BOX BINDING FACTOR 2); DNA binding / transcription factor MFMR bZIP_1 bZIP_2
AT4G02640.1 BZO2H1 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 10); DNA binding / protein heterodimerization/ sequence-specific DNA binding / transcription factor bZIP_1 bZIP_2
AT4G02640.2 BZO2H1 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 10); DNA binding / transcription factor bZIP_1 bZIP_2
AT4G34000.1 ABF3/DPBF5 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / protein binding / transcription activator/ transcription factor bZIP_1 bZIP_2
AT4G34000.2 ABF3/DPBF5 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / protein binding / transcription activator/ transcription factor bZIP_1 bZIP_2
AT4G34000.3 ABF3/DPBF5 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / protein binding / transcription activator/ transcription factor bZIP_1 bZIP_2
AT4G34590.1 GBF6 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 11); DNA binding / protein heterodimerization/ transcription factor bZIP_1 bZIP_2
AT4G35040.1 bZIP transcription factor family protein bZIP_1 bZIP_2
AT4G36730.1 GBF1 (G-box binding factor 1); transcription factor MFMR bZIP_1 bZIP_2
AT4G36730.2 GBF1 (G-box binding factor 1); transcription factor MFMR bZIP_1 bZIP_2
AT4G37730.1 ATBZIP7 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 7); DNA binding / transcription factor bZIP_1 bZIP_2
AT4G38900.1 bZIP protein bZIP_2
AT4G38900.2 bZIP protein bZIP_1 bZIP_2
AT4G38900.3 bZIP protein bZIP_1 bZIP_2
AT5G06839.1 bZIP family transcription factor bZIP_2
AT5G06839.2 bZIP family transcription factor bZIP_2
AT5G06950.1 AHBP-1B (bZIP transcription factor HBP-1b homolog); DNA binding / transcription factor/ transcription repressor bZIP_2
AT5G06950.2 AHBP-1B (bZIP transcription factor HBP-1b homolog); DNA binding / transcription factor bZIP_2
AT5G06950.3 AHBP-1B (bZIP transcription factor HBP-1b homolog); DNA binding / transcription factor bZIP_2
AT5G06950.4 AHBP-1B (bZIP transcription factor HBP-1b homolog) bZIP_2
AT5G06960.1 OBF5 (OCS-ELEMENT BINDING FACTOR 5); DNA binding / transcription factor bZIP_2
AT5G06960.2 OBF5 (OCS-ELEMENT BINDING FACTOR 5); DNA binding / transcription factor bZIP_2
AT5G07160.1 DNA binding / transcription factor bZIP_2
AT5G08141.1 ATBZIP75 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 75); DNA binding / transcription factor bZIP_2
AT5G10030.1 TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor bZIP_1 bZIP_2
AT5G11260.1 HY5 (ELONGATED HYPOCOTYL 5); DNA binding / transcription factor bZIP_1 bZIP_2
AT5G15830.1 ATBZIP3 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 3); DNA binding / transcription factor bZIP_1 bZIP_2
AT5G24800.1 ATBZIP9/BZO2H2 (BASIC LEUCINE ZIPPER O2 HOMOLOG 2); DNA binding / protein heterodimerization/ transcription factor bZIP_1 bZIP_2
AT5G28770.1 BZO2H3 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 63); DNA binding / protein heterodimerization/ transcription factor bZIP_1 bZIP_2
AT5G28770.2 BZO2H3 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 63); DNA binding / transcription factor bZIP_1 bZIP_2
AT5G28770.3 BZO2H3 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 63); DNA binding / transcription factor bZIP_1 bZIP_2
AT5G38800.1 ATBZIP43 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 43); DNA binding / transcription factor bZIP_1 bZIP_2
AT5G42910.1 basic leucine zipper transcription factor (BZIP15) bZIP_1 bZIP_2
AT5G44080.1 bZIP transcription factor family protein bZIP_1 bZIP_2
AT5G49450.1 ATBZIP1 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 1); DNA binding / protein heterodimerization/ transcription factor bZIP_2
AT5G60830.1 ATBZIP70 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 70); DNA binding / transcription factor bZIP_1 bZIP_2
AT5G65210.1 TGA1; DNA binding / calmodulin binding / transcription factor bZIP_1 bZIP_2
AT5G65210.2 TGA1; DNA binding / calmodulin binding / transcription factor bZIP_1 bZIP_2
AT5G65210.3 TGA1; DNA binding / calmodulin binding / transcription factor bZIP_1 bZIP_2
AT5G65210.4 TGA1; DNA binding / calmodulin binding / transcription factor bZIP_1 bZIP_2
AT5G65210.5 TGA1; DNA binding / calmodulin binding / transcription factor bZIP_1 bZIP_2
AT5G65210.6 TGA1 bZIP_1 bZIP_2

General references

Corrêa, LG; Riaño-Pachón, DM; Schrago, CG; dos Santos, RV; Mueller-Roeber, B; Vincentz, M. 2008. The role of bZIP transcription factors in green plant evolution: adaptive features emerging from four founder genes. PLoS ONE 3(8):e2944 PUBMEDID:18698409
Foster, R; Izawa, T; Chua, NH. 1994. Plant bZIP proteins gather at ACGT elements. FASEB J. 8(2):192-200 PUBMEDID:8119490
Hurst, HC. 1995. Transcription factors 1: bZIP proteins. Protein Profile 2(2):101-68 PUBMEDID:7780801
Landschulz, WH; Johnson, PF; McKnight, SL. 1988. The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins. Science 240(4860):1759-64 PUBMEDID:3289117
Vinson, C; Acharya, A; Taparowsky, EJ. 2006. Deciphering B-ZIP transcription factor interactions in vitro and in vivo. Biochim. Biophys. Acta 1759(1-2):4-12 PUBMEDID:16580748

Specific references

Jakoby, M; Weisshaar, B; Droge-Laser, W; Vicente-Carbajosa, J; Tiedemann, J; Kroj, T; Parcy, F; bZIP Research Group. 2002. bZIP transcription factors in Arabidopsis Trends Plant Sci 7(3):106-11 PUBMEDID:11906833
Schindler, U; Beckmann, H; Cashmore, AR. 1992. TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG. Plant Cell 4(10):1309-19 PUBMEDID:1446171