Plant Transcription factor database - Universität Potsdam
version: 3.0

Zea mays bZIP Family

Description

Jakoby et al. 2002: In plants, basic region/leucine zipper motif (bZIP) transcription factors regulate processes including pathogen defence, light and stress signalling, seed maturation and flower development.

Members of this family
  SHOULD possess bZIP_1 bZIP_2 bZIP_Maf domains
  SHOULD NOT possess HLH domain

Domain alignments

Benchmark against A. thaliana

The Sensitivity and Positive Predictive Value (PPV) were assessed for this family. The data reported by Jakoby et al. 2002 for A. thaliana were taken as gold standard.

The gold standard reported 74 members for this family, 68 of which are present in ArabTFDB, giving a PPV of 0.97. Six additional members not present in ArabTFDB might be false negatives, giving a Sensitivity of 0.92.

This family is also present in:

References

There are 238 gene models in this family



Gene modelDescriptionDomains
AC191536.3_FGP036 bZIP_1 bZIP_2
AC203408.4_FGP035 bZIP_1 bZIP_2
AC204554.3_FGP020 bZIP_1
AC204897.3_FGP039 bZIP_1 bZIP_2
AC205490.4_FGP043 bZIP_1 bZIP_2
AC206505.3_FGP028 bZIP_1 bZIP_2
AC208031.3_FGP032 bZIP_1 bZIP_2
AC209837.4_FGP031 bZIP_1 bZIP_2
AC210010.4_FGP027 bZIP_1 bZIP_2
AC217904.2_FGP044 bZIP_1 bZIP_2
GRMZM2G000171_P01 bZIP_2
GRMZM2G000171_P02 bZIP_2
GRMZM2G000171_P03 bZIP_2
GRMZM2G000171_P04 bZIP_2
GRMZM2G000171_P05 bZIP_2
GRMZM2G000842_P01 bZIP_2
GRMZM2G000842_P02 bZIP_2
GRMZM2G000842_P03 bZIP_2
GRMZM2G000842_P04 bZIP_1 bZIP_2
GRMZM2G002075_P01 bZIP_1 bZIP_2
GRMZM2G006578_P01 bZIP_1 bZIP_2
GRMZM2G006578_P02 bZIP_1 bZIP_2
GRMZM2G007063_P01 bZIP_1 bZIP_2
GRMZM2G007063_P04 bZIP_1 bZIP_2
GRMZM2G011932_P01 MFMR bZIP_1 bZIP_2
GRMZM2G011932_P03 MFMR bZIP_1 bZIP_2
GRMZM2G011932_P04 MFMR bZIP_1 bZIP_2
GRMZM2G012205_P01 bZIP_1 bZIP_2
GRMZM2G012205_P02 bZIP_1 bZIP_2
GRMZM2G015534_P01 bZIP_1 bZIP_2
GRMZM2G015534_P02 bZIP_1 bZIP_2
GRMZM2G015534_P03 bZIP_1 bZIP_2
GRMZM2G016150_P01 bZIP_1 bZIP_2
GRMZM2G019106_P01 MFMR bZIP_1 bZIP_2
GRMZM2G019446_P01 bZIP_1 bZIP_2
GRMZM2G019521_P01 bZIP_2
GRMZM2G019589_P01 bZIP_1 bZIP_2
GRMZM2G019589_P02 bZIP_1 bZIP_2
GRMZM2G020799_P01 bZIP_1 bZIP_2
GRMZM2G020993_P01 bZIP_1 bZIP_2
GRMZM2G020993_P02 bZIP_2
GRMZM2G023767_P01 bZIP_1 bZIP_2
GRMZM2G025812_P01 bZIP_1 bZIP_2
GRMZM2G025812_P02 bZIP_1 bZIP_2
GRMZM2G027976_P01 bZIP_1 bZIP_2
GRMZM2G029516_P01 bZIP_2
GRMZM2G030877_P01 bZIP_1
GRMZM2G030877_P02 bZIP_1
GRMZM2G033049_P01 bZIP_1 bZIP_2
GRMZM2G033049_P02 bZIP_1 bZIP_2
GRMZM2G033230_P01 bZIP_1 bZIP_2
GRMZM2G033230_P02 bZIP_1 bZIP_2
GRMZM2G037910_P01 bZIP_1 bZIP_2
GRMZM2G038015_P01 bZIP_2
GRMZM2G039828_P01 bZIP_1 bZIP_2
GRMZM2G042960_P01 bZIP_1
GRMZM2G043600_P01 bZIP_1 bZIP_2
GRMZM2G043660_P01 bZIP_1 bZIP_2
GRMZM2G045236_P01 bZIP_1 bZIP_2
GRMZM2G045236_P02 bZIP_1 bZIP_2
GRMZM2G052102_P01 bZIP_1 bZIP_2
GRMZM2G053255_P01 bZIP_1 bZIP_2
GRMZM2G055413_P01 bZIP_2
GRMZM2G055413_P02 bZIP_2
GRMZM2G055413_P03 bZIP_2
GRMZM2G055413_P04 bZIP_2
GRMZM2G055413_P05 bZIP_2
GRMZM2G055413_P06 bZIP_2
GRMZM2G055413_P07 bZIP_2
GRMZM2G055597_P01 bZIP_1
GRMZM2G055597_P02 bZIP_1
GRMZM2G055597_P03 bZIP_1
GRMZM2G055597_P04 bZIP_1
GRMZM2G058172_P01 bZIP_1 bZIP_2
GRMZM2G060109_P01 bZIP_1 bZIP_2
GRMZM2G060216_P01 bZIP_2
GRMZM2G060216_P02 bZIP_2
GRMZM2G060290_P01 bZIP_1 bZIP_2
GRMZM2G061509_P01 bZIP_2
GRMZM2G061509_P02 bZIP_2
GRMZM2G061509_P03 bZIP_2
GRMZM2G061509_P04 bZIP_2
GRMZM2G061509_P05 bZIP_2
GRMZM2G061509_P06 bZIP_2
GRMZM2G061509_P07 bZIP_2
GRMZM2G061517_P01 bZIP_1 bZIP_2
GRMZM2G062391_P01 bZIP_1 bZIP_2
GRMZM2G062736_P01 bZIP_1 bZIP_2
GRMZM2G063106_P01 bZIP_1 bZIP_2
GRMZM2G063106_P02 bZIP_1 bZIP_2
GRMZM2G063106_P03 bZIP_1 bZIP_2
GRMZM2G063106_P04 bZIP_1 bZIP_2
GRMZM2G066581_P01 bZIP_1
GRMZM2G066734_P01 bZIP_1 bZIP_2
GRMZM2G068844_P01 bZIP_1 bZIP_2
GRMZM2G069396_P01 bZIP_1 bZIP_2
GRMZM2G073427_P02 bZIP_1 bZIP_2
GRMZM2G073427_P03 bZIP_1 bZIP_2
GRMZM2G073427_P04 bZIP_1 bZIP_2
GRMZM2G073427_P07 bZIP_1 bZIP_2
GRMZM2G073892_P01 bZIP_1 bZIP_2
GRMZM2G073892_P02 bZIP_2
GRMZM2G074373_P01 MFMR bZIP_1 bZIP_2
GRMZM2G074373_P02 MFMR bZIP_1 bZIP_2
GRMZM2G077124_P03 bZIP_1 bZIP_2
GRMZM2G078975_P01 bZIP_1 bZIP_2
GRMZM2G079365_P01 bZIP_1 bZIP_2
GRMZM2G079524_P01 bZIP_1 bZIP_2
GRMZM2G080111_P01 bZIP_1 bZIP_2
GRMZM2G080731_P01 bZIP_1
GRMZM2G080731_P02 bZIP_1
GRMZM2G080731_P03 bZIP_1
GRMZM2G080731_P04 bZIP_1
GRMZM2G087565_P01 bZIP_2
GRMZM2G087565_P02 bZIP_2
GRMZM2G087565_P03 bZIP_2
GRMZM2G087565_P04 bZIP_2
GRMZM2G087565_P05 bZIP_2
GRMZM2G087565_P06 bZIP_2
GRMZM2G087565_P07 bZIP_2
GRMZM2G091555_P01 bZIP_1
GRMZM2G092137_P01 bZIP_1 bZIP_2
GRMZM2G093020_P01 bZIP_1
GRMZM2G093153_P01 bZIP_1 bZIP_2
GRMZM2G094352_P01 bZIP_1
GRMZM2G094352_P02 bZIP_1
GRMZM2G095078_P01 MFMR bZIP_1 bZIP_2
GRMZM2G095078_P02 MFMR bZIP_1 bZIP_2
GRMZM2G095814_P01 bZIP_1 bZIP_2
GRMZM2G098904_P01 bZIP_1 bZIP_2
GRMZM2G098904_P02 bZIP_1 bZIP_2
GRMZM2G102170_P01 bZIP_1 bZIP_2
GRMZM2G103647_P01 bZIP_1 bZIP_2
GRMZM2G103647_P03 bZIP_1 bZIP_2
GRMZM2G108223_P01 bZIP_1 bZIP_2
GRMZM2G108401_P01 bZIP_1 bZIP_2
GRMZM2G112483_P01 bZIP_1 bZIP_2
GRMZM2G112483_P02 bZIP_1 bZIP_2
GRMZM2G113122_P01 bZIP_1 bZIP_2
GRMZM2G113122_P02 bZIP_1 bZIP_2
GRMZM2G117260_P01 bZIP_2
GRMZM2G117851_P01 MFMR bZIP_1 bZIP_2
GRMZM2G118393_P01 bZIP_1 bZIP_2
GRMZM2G122846_P01 bZIP_1 bZIP_2
GRMZM2G125243_P01 bZIP_2
GRMZM2G125243_P02 bZIP_2
GRMZM2G125384_P01 bZIP_1 bZIP_2
GRMZM2G125934_P01 bZIP_1 bZIP_2
GRMZM2G125934_P02 bZIP_2
GRMZM2G129247_P02 bZIP_1 bZIP_2
GRMZM2G129247_P03 bZIP_1 bZIP_2
GRMZM2G129256_P01 bZIP_1 bZIP_2
GRMZM2G129518_P01 bZIP_1 bZIP_2
GRMZM2G129518_P02 bZIP_1 bZIP_2
GRMZM2G131961_P02 bZIP_2
GRMZM2G131961_P05 bZIP_2
GRMZM2G132868_P01 bZIP_1 bZIP_2
GRMZM2G132976_P01 bZIP_1
GRMZM2G132976_P02 bZIP_1
GRMZM2G133331_P01 bZIP_1
GRMZM2G133331_P02 bZIP_1
GRMZM2G133331_P03 bZIP_1
GRMZM2G133331_P04 bZIP_1
GRMZM2G135987_P01 bZIP_1 bZIP_2
GRMZM2G136266_P01 bZIP_1 bZIP_2
GRMZM2G136266_P02 bZIP_1 bZIP_2
GRMZM2G137046_P01 bZIP_1 bZIP_2
GRMZM2G137532_P01 bZIP_2
GRMZM2G138619_P01 bZIP_1 bZIP_2
GRMZM2G140355_P01 bZIP_1 bZIP_2
GRMZM2G142187_P01 bZIP_2
GRMZM2G142187_P02 bZIP_2
GRMZM2G144480_P01 bZIP_1 bZIP_2
GRMZM2G144953_P01 bZIP_1 bZIP_2
GRMZM2G144953_P02 bZIP_1 bZIP_2
GRMZM2G144953_P03 bZIP_1 bZIP_2
GRMZM2G144953_P04 bZIP_1 bZIP_2
GRMZM2G145425_P01 MFMR bZIP_1 bZIP_2
GRMZM2G145425_P03 MFMR bZIP_1 bZIP_2
GRMZM2G145425_P05 MFMR bZIP_1 bZIP_2
GRMZM2G145571_P01 bZIP_2
GRMZM2G146020_P01 bZIP_1 bZIP_2
GRMZM2G146020_P02 bZIP_1 bZIP_2
GRMZM2G149040_P01 bZIP_1 bZIP_2
GRMZM2G149150_P01 bZIP_1 bZIP_2
GRMZM2G149961_P01 bZIP_1 bZIP_2
GRMZM2G151295_P02 bZIP_1 bZIP_2
GRMZM2G151491_P01 bZIP_2
GRMZM2G151491_P02 bZIP_2
GRMZM2G151491_P03 bZIP_2
GRMZM2G151491_P04 bZIP_2
GRMZM2G151491_P05 bZIP_2
GRMZM2G151491_P06 bZIP_2
GRMZM2G151491_P07 bZIP_2
GRMZM2G153144_P01 MFMR bZIP_1 bZIP_2
GRMZM2G157177_P01 MFMR bZIP_1 bZIP_2
GRMZM2G157177_P02 MFMR bZIP_1 bZIP_2
GRMZM2G157722_P01 bZIP_1 bZIP_2
GRMZM2G157722_P02 bZIP_1 bZIP_2
GRMZM2G158313_P01 bZIP_1 bZIP_2
GRMZM2G159006_P01 MFMR bZIP_1 bZIP_2
GRMZM2G159134_P01 bZIP_1 bZIP_2
GRMZM2G159134_P02 bZIP_1 bZIP_2
GRMZM2G161009_P01 bZIP_1 bZIP_2
GRMZM2G161602_P01 bZIP_1 bZIP_2
GRMZM2G161602_P02 bZIP_1 bZIP_2
GRMZM2G163643_P01 bZIP_1
GRMZM2G163643_P03 bZIP_1
GRMZM2G164622_P01 MFMR bZIP_1 bZIP_2
GRMZM2G167448_P01 bZIP_1 bZIP_2
GRMZM2G167448_P02 bZIP_2
GRMZM2G168079_P01 bZIP_1 bZIP_2
GRMZM2G168204_P01 bZIP_1 bZIP_2
GRMZM2G171370_P01 bZIP_1 bZIP_2
GRMZM2G171370_P03 MFMR bZIP_1 bZIP_2
GRMZM2G171370_P04 MFMR bZIP_1 bZIP_2
GRMZM2G171912_P01 bZIP_1 bZIP_2
GRMZM2G172048_P01 bZIP_1 bZIP_2
GRMZM2G172246_P01 bZIP_2
GRMZM2G172246_P05 bZIP_2
GRMZM2G175267_P01 bZIP_2
GRMZM2G175267_P02 bZIP_2
GRMZM2G175267_P03 bZIP_2
GRMZM2G175267_P04 bZIP_2
GRMZM2G175267_P05 bZIP_2
GRMZM2G175280_P01 bZIP_1 bZIP_2
GRMZM2G175280_P02 bZIP_1 bZIP_2
GRMZM2G175567_P01 bZIP_1 bZIP_2
GRMZM2G175870_P01 bZIP_1 bZIP_2
GRMZM2G175870_P02 bZIP_1 bZIP_2
GRMZM2G175870_P03 bZIP_1 bZIP_2
GRMZM2G175870_P04 bZIP_1 bZIP_2
GRMZM2G177046_P01 bZIP_1 bZIP_2
GRMZM2G178231_P02 bZIP_1 bZIP_2
GRMZM2G179587_P01 bZIP_1 bZIP_2
GRMZM2G180598_P01 bZIP_1 bZIP_2
GRMZM2G180847_P01 bZIP_1 bZIP_2
GRMZM2G181190_P01 bZIP_1 bZIP_2

General references

Corrêa, LG; Riaño-Pachón, DM; Schrago, CG; dos Santos, RV; Mueller-Roeber, B; Vincentz, M. 2008. The role of bZIP transcription factors in green plant evolution: adaptive features emerging from four founder genes. PLoS ONE 3(8):e2944 PUBMEDID:18698409
Foster, R; Izawa, T; Chua, NH. 1994. Plant bZIP proteins gather at ACGT elements. FASEB J. 8(2):192-200 PUBMEDID:8119490
Hurst, HC. 1995. Transcription factors 1: bZIP proteins. Protein Profile 2(2):101-68 PUBMEDID:7780801
Landschulz, WH; Johnson, PF; McKnight, SL. 1988. The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins. Science 240(4860):1759-64 PUBMEDID:3289117
Vinson, C; Acharya, A; Taparowsky, EJ. 2006. Deciphering B-ZIP transcription factor interactions in vitro and in vivo. Biochim. Biophys. Acta 1759(1-2):4-12 PUBMEDID:16580748