Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 101022

Identification

Species:
Selaginella moellendorffii
Gene model
101022
Description
e_gw1.24.551.1
Family
PHD
3D structure (top 5)
1MVH 2F69 2W5Y 3F9X 3H6L
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Coccomyxa sp. C-169

26481 Score: 1

Micromonas pusilla CCMP1545

21435 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g38440.1 Score: 1

Zea mays

GRMZM2G013794_P02 Score: 1

Expression data

Expressed Sequence Tags

At.14356
Arabidopsis thaliana ATX1 (ARABIDOPSIS HOMOLOGUE OF TRITHORAX); histone-lysine N-methyltransferase/ phosphatidylinositol-5-phosphate binding (ATX1) mRNA, complete cds /cds=p(1,3189) /gb=NM_179839
At.46306
Arabidopsis thaliana mRNA for tri-thorax like protein, clone: RAFL07-12-E24 /gb=AK226560
Hv.15798
HVSMEl0010L24f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEl0010L24f, mRNA sequence /clone=HVSMEl0010L24f /gb=BI948766
Os.7059
Oryza sativa Japonica Group cDNA clone:J033074A15, full insert sequence /cds=p(186,3254) /gb=AK074022
Ppa.20534
Physcomitrella patens subsp. patens trithorax-like protein, histone-lysine N-methyltransferase (SDG1512) mRNA, complete cds /cds=p(1,2709) /gb=XM_001780535

Domain Architecture

PHD PF00628 101022
DomainStartEndBit scoreE-value
PHD459336.21.3e-07
SET340470150.26.3e-42

Sequences