Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 104814

Identification

Species:
Micromonas sp. RCC299
Gene model
104814
Description
estExt_fgenesh2_kg.C_Chr_050003
Family
MYB-related
3D structure (top 5)
2FQ3 2DCE 2COM 2YUS 2ELK
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Arabidopsis lyrata

472410 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Arabidopsis thaliana

AT1G21700.1 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Chlorella sp. NC64A

134832 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Ostreococcus lucimarinus

88885 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g08080.1 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Ostreococcus tauri

36057 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Physcomitrella patens

163618 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Populus trichocarpa

410826 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Sorghum bicolor

4822356 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Selaginella moellendorffii

442222 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Vitis vinifera

GSVIVP00015425001 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Zea mays

GRMZM2G139760_P03 Score: 1
GRMZM2G139760_P04 Score: 0.989
GRMZM2G139760_P01 Score: 0.987
GRMZM2G139760_P02 Score: 0.977

Domain Architecture

SWIRM PF04433 104814
DomainStartEndBit scoreE-value
SWIRM44453478.72.1e-20
Myb_DNA-binding75079537.45.7e-08

Sequences