Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 10529

Identification

Species:
Physcomitrella patens
Gene model
10529
Description
gw1.90.20.1
Family
RB
3D structure (top 5)
2R7G 2QDJ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Cyanidioschyzon merolae

CMT038C Score: 1

Chlorella sp. NC64A

145378 Score: 1

Chlamydomonas reinhardtii

187248 Score: 1

Micromonas sp. RCC299

64476 Score: 1

Physcomitrella patens

10529 Score: 1
135927 Score: 1

Ostreococcus lucimarinus

27862 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g42600.2 Score: 1
LOC_Os08g42600.1 Score: 0.996

Sorghum bicolor

4764709 Score: 1

Selaginella moellendorffii

97707 Score: 1

Physcomitrella patens

10529 Score: 1
135927 Score: 1

Zea mays

GRMZM2G033828_P01 Score: 1
GRMZM2G033828_P03 Score: 1
GRMZM2G137537_P02 Score: 1
GRMZM2G137537_P03 Score: 1
GRMZM2G033828_P02 Score: 0.996
GRMZM2G137537_P01 Score: 0.996

Expression data

Expressed Sequence Tags

Pba.3797
F079P63Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA sequence /gb=BI137072
Pth.3797
F079P63Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA sequence /gb=BI137072

Domain Architecture

RB_A PF01858 10529
DomainStartEndBit scoreE-value
RB_A390586333.63.6e-97
RB_B705836168.22.1e-47

Sequences