version: 3.0
Gene model: 108327
Identification
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Genome Databases
Orthologs and co-orthologs (in-paralogs)
Look for sequence homologs using SIMAP@MIPS
SIMAPOrtholog identification by INPARANOID
Arabidopsis lyrata
488541 Score: 1Arabidopsis thaliana
AT5G16820.1 Score: 1AT5G16820.2 Score: 1
Oryza sativa subsp. japonica
LOC_Os03g63750.1 Score: 1Populus trichocarpa
813327 Score: 1Sorghum bicolor
5047670 Score: 1Vitis vinifera
GSVIVP00015710001 Score: 1Zea mays
GRMZM2G069437_P01 Score: 1GRMZM2G084107_P01 Score: 1
Expression data
- NCBI EST Profile Viewer (UniGene: At.32971)
- NCBI EST Profile Viewer (UniGene: At.38933)
- NCBI EST Profile Viewer (UniGene: At.6312)
- NCBI EST Profile Viewer (UniGene: Cre.13799)
- NCBI EST Profile Viewer (UniGene: Mtr.22152)
- NCBI EST Profile Viewer (UniGene: Os.10942)
- NCBI EST Profile Viewer (UniGene: Os.18587)
- NCBI EST Profile Viewer (UniGene: Os.9717)
- NCBI EST Profile Viewer (UniGene: Pba.5303)
- NCBI EST Profile Viewer (UniGene: Pba.6450)
- NCBI EST Profile Viewer (UniGene: Ppa.16751)
- NCBI EST Profile Viewer (UniGene: Ppa.23110)
- NCBI EST Profile Viewer (UniGene: Ppa.23943)
- NCBI EST Profile Viewer (UniGene: Ppa.286)
- NCBI EST Profile Viewer (UniGene: Pth.5303)
- NCBI EST Profile Viewer (UniGene: Pth.6450)
- NCBI EST Profile Viewer (UniGene: Vvi.23635)
Expressed Sequence Tags
- At.32971
- Arabidopsis thaliana HSF1 (ARABIDOPSIS HEAT SHOCK FACTOR 1); DNA binding / transcription factor (HSF1) mRNA, complete cds /cds=p(1,1488) /gb=NM_117884
- At.38933
- Arabidopsis thaliana ATHSFA2 (Arabidopsis thaliana heat shock transcription factor A2) (ATHSFA2) mRNA, complete cds /cds=p(371,1243) /gb=NM_001124916
- At.6312
- Arabidopsis thaliana putative heat shock protein (At3g22830) mRNA, complete cds /cds=p(162,1382) /gb=AY045974
- Cre.13799
- Chlamydomonas reinhardtii heat shock factor 1 (HSF1) mRNA, complete cds /cds=p(172,2577) /gb=EF136572
- Mtr.22152
- NF106H11DT1F1094 Drought Medicago truncatula cDNA clone NF106H11DT 5', mRNA sequence /clone=NF106H11DT /clone_end=5' /gb=BF636270
- Os.10942
- Oryza sativa Japonica Group cDNA clone:J023077L03, full insert sequence /gb=AK072391
- Os.18587
- Oryza sativa Japonica Group cDNA clone:J033067M16, full insert sequence /gb=AK101824
- Os.9717
- Oryza sativa Japonica Group cDNA clone:J023088F14, full insert sequence /cds=p(126,1646) /gb=AK100430
- Pba.5303
- WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
- Pba.6450
- WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777
- Ppa.16751
- Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_206139) mRNA, partial cds /cds=p(377,1177) /gb=XM_001758240
- Ppa.23110
- Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_108327) mRNA, complete cds /cds=p(1,1224) /gb=XM_001778961
- Ppa.23943
- CAYY25595.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY25595 5', mRNA sequence /clone=CAYY25595 /clone_end=5' /gb=FC349157
- Ppa.286
- CBAX8015.fwd CBAX Physcomitrella patens subsp. patens Gransden - dessicated (L) Physcomitrella patens subsp. patens cDNA clone CBAX8015 5', mRNA sequence /clone=CBAX8015 /clone_end=5' /gb=FC453857
- Pth.5303
- WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
- Pth.6450
- WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777
- Vvi.23635
- S9B09290 Ripening Berries (VvS9) Vitis vinifera cDNA clone S9B09290, mRNA sequence /clone=S9B09290 /gb=EE101448