Gene model: 108327

Species: Physcomitrella patens Gene model 108327 Description estExt_fgenesh1_pm.C_2490014 Family HSF 3D structure (top 5) 1HKS 3HTS
	PDB entry: 1HKS 3HTS

• JGI/DOE

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

488541 Score: 1

Arabidopsis thaliana

AT5G16820.1 Score: 1
AT5G16820.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g63750.1 Score: 1

Populus trichocarpa

813327 Score: 1

Sorghum bicolor

5047670 Score: 1

Vitis vinifera

GSVIVP00015710001 Score: 1

Zea mays

GRMZM2G069437_P01 Score: 1
GRMZM2G084107_P01 Score: 1

• NCBI EST Profile Viewer (UniGene: At.32971)
• NCBI EST Profile Viewer (UniGene: At.38933)
• NCBI EST Profile Viewer (UniGene: At.6312)
• NCBI EST Profile Viewer (UniGene: Cre.13799)
• NCBI EST Profile Viewer (UniGene: Mtr.22152)
• NCBI EST Profile Viewer (UniGene: Os.10942)
• NCBI EST Profile Viewer (UniGene: Os.18587)
• NCBI EST Profile Viewer (UniGene: Os.9717)
• NCBI EST Profile Viewer (UniGene: Pba.5303)
• NCBI EST Profile Viewer (UniGene: Pba.6450)
• NCBI EST Profile Viewer (UniGene: Ppa.16751)
• NCBI EST Profile Viewer (UniGene: Ppa.23110)
• NCBI EST Profile Viewer (UniGene: Ppa.23943)
• NCBI EST Profile Viewer (UniGene: Ppa.286)
• NCBI EST Profile Viewer (UniGene: Pth.5303)
• NCBI EST Profile Viewer (UniGene: Pth.6450)
• NCBI EST Profile Viewer (UniGene: Vvi.23635)

At.32971

Arabidopsis thaliana HSF1 (ARABIDOPSIS HEAT SHOCK FACTOR 1); DNA binding / transcription factor (HSF1) mRNA, complete cds /cds=p(1,1488) /gb=NM_117884

At.38933

Arabidopsis thaliana ATHSFA2 (Arabidopsis thaliana heat shock transcription factor A2) (ATHSFA2) mRNA, complete cds /cds=p(371,1243) /gb=NM_001124916

At.6312

Arabidopsis thaliana putative heat shock protein (At3g22830) mRNA, complete cds /cds=p(162,1382) /gb=AY045974

Cre.13799

Chlamydomonas reinhardtii heat shock factor 1 (HSF1) mRNA, complete cds /cds=p(172,2577) /gb=EF136572

Mtr.22152

NF106H11DT1F1094 Drought Medicago truncatula cDNA clone NF106H11DT 5', mRNA sequence /clone=NF106H11DT /clone_end=5' /gb=BF636270

Os.10942

Oryza sativa Japonica Group cDNA clone:J023077L03, full insert sequence /gb=AK072391

Os.18587

Oryza sativa Japonica Group cDNA clone:J033067M16, full insert sequence /gb=AK101824

Os.9717

Oryza sativa Japonica Group cDNA clone:J023088F14, full insert sequence /cds=p(126,1646) /gb=AK100430

Pba.5303

WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055

Pba.6450

WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777

Ppa.16751

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_206139) mRNA, partial cds /cds=p(377,1177) /gb=XM_001758240

Ppa.23110

Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_108327) mRNA, complete cds /cds=p(1,1224) /gb=XM_001778961

Ppa.23943

CAYY25595.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY25595 5', mRNA sequence /clone=CAYY25595 /clone_end=5' /gb=FC349157

Ppa.286

CBAX8015.fwd CBAX Physcomitrella patens subsp. patens Gransden - dessicated (L) Physcomitrella patens subsp. patens cDNA clone CBAX8015 5', mRNA sequence /clone=CBAX8015 /clone_end=5' /gb=FC453857

Pth.5303

WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055

Pth.6450

WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777

Vvi.23635

S9B09290 Ripening Berries (VvS9) Vitis vinifera cDNA clone S9B09290, mRNA sequence /clone=S9B09290 /gb=EE101448

protein sequence
transcript sequence