Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 110353

Identification

Species:
Selaginella moellendorffii
Gene model
110353
Description
e_gw1.40.493.1
Family
SET
3D structure (top 5)
1MVH 3BO5 2F69 2R3A 1H3I
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483538 Score: 1

Arabidopsis thaliana

AT2G44150.1 Score: 1

Carica papaya

evm.TU.supercontig_9.229 Score: 1

Micromonas sp. RCC299

83006 Score: 1

Ostreococcus lucimarinus

5572 Score: 1
5592 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.1 Score: 1
LOC_Os09g13740.2 Score: 1

Physcomitrella patens

33525 Score: 1

Populus trichocarpa

585029 Score: 1

Sorghum bicolor

5038622 Score: 1

Vitis vinifera

GSVIVP00013886001 Score: 1

Zea mays

GRMZM2G033694_P01 Score: 1
GRMZM2G033694_P02 Score: 1
GRMZM2G033694_P03 Score: 0.987

Expression data

Expressed Sequence Tags

At.54011
Arabidopsis thaliana ASHH4 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH4) (ASHH4) mRNA, complete cds /cds=p(1,1059) /gb=NM_115859
Hv.2514
HVSMEg0018E08f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0018E08f, mRNA sequence /clone=HVSMEg0018E08f /gb=BG345006

Domain Architecture

SET PF00856 110353
DomainStartEndBit scoreE-value
SET79208164.23.8e-46

Sequences

protein sequence
transcript sequence