version: 3.0

Gene model: 110395

Identification

Species: Selaginella moellendorffii Gene model 110395 Description e_gw1.40.372.1 Family SNF2 3D structure (top 5) 1Z5Z 2OCA 1Z63 1WP9 3DMQ
	PDB entry:

Genome Databases

JGI/DOE

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

496925 Score: 1

Arabidopsis thaliana

AT5G66750.1 Score: 1

Cyanidioschyzon merolae

CMJ200C Score: 1

Chlorella sp. NC64A

22847 Score: 1

Carica papaya

evm.TU.supercontig_55.90 Score: 1

Chlamydomonas reinhardtii

196757 Score: 1

Coccomyxa sp. C-169

81159 Score: 1

Micromonas pusilla CCMP1545

54122 Score: 1

Micromonas sp. RCC299

58978 Score: 1

Ostreococcus lucimarinus

37662 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g27060.1 Score: 1

Ostreococcus tauri

913 Score: 1

Physcomitrella patens

210776 Score: 1

Populus trichocarpa

250259 Score: 1

Sorghum bicolor

4787057 Score: 1
5048252 Score: 1

Vitis vinifera

GSVIVP00024954001 Score: 1

Zea mays

GRMZM2G177165_P01 Score: 1

Expression data

NCBI EST Profile Viewer (UniGene: At.28851)

Expressed Sequence Tags

At.28851: Arabidopsis thaliana CHR01/DDM1 (DECREASED DNA METHYLATION 1); helicase (CHR01/DDM1) mRNA, complete cds /cds=p(100,2394) /gb=NM_126073

Domain Architecture

Domain	Start	End	Bit score	E-value
SNF2_N	132	428	381.2	1.9e-111
Helicase_C	485	561	91.7	2.6e-24

Sequences

protein sequence
transcript sequence