Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 111860

Identification

Species:
Selaginella moellendorffii
Gene model
111860
Description
e_gw1.43.192.1
Family
SET
3D structure (top 5)
2R3A 2RFI 1ML9 3H6L 2W5Y
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Selaginella moellendorffii

446978 Score: 1
111860 Score: 0.958

Arabidopsis lyrata

481208 Score: 1

Selaginella moellendorffii

446978 Score: 1
111860 Score: 0.958

Arabidopsis thaliana

AT2G23380.1 Score: 1

Selaginella moellendorffii

111860 Score: 1
446978 Score: 1

Cyanidioschyzon merolae

CMQ156C Score: 1

Selaginella moellendorffii

111860 Score: 1
446978 Score: 1

Carica papaya

evm.TU.supercontig_55.122 Score: 1

Selaginella moellendorffii

446978 Score: 1
111860 Score: 0.97

Micromonas sp. RCC299

63548 Score: 1

Selaginella moellendorffii

446978 Score: 1
111860 Score: 0.955

Oryza sativa subsp. japonica

LOC_Os06g16390.1 Score: 1

Selaginella moellendorffii

111860 Score: 1
446978 Score: 1

Populus trichocarpa

719252 Score: 1
818400 Score: 1

Selaginella moellendorffii

111860 Score: 1
446978 Score: 1

Sorghum bicolor

4896633 Score: 1

Selaginella moellendorffii

446978 Score: 1
111860 Score: 0.955

Vitis vinifera

GSVIVP00019523001 Score: 1

Selaginella moellendorffii

446978 Score: 1
111860 Score: 0.956

Zea mays

GRMZM2G043484_P01 Score: 1
GRMZM2G043484_P02 Score: 0.995
GRMZM2G063030_P01 Score: 0.995

Expression data

Expressed Sequence Tags

Os.44686
Oryza sativa (japonica cultivar-group) Os06g0275500 (Os06g0275500) mRNA, complete cds /cds=p(294,2984) /gb=NM_001063914
Os.96671
CI219033 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks after flowering and supermix Oryza sativa (japonica cultivar-group) cDNA clone 039-M068R-D12 3', mRNA sequence /clone=039-M068R-D12 /clone_end=3' /gb=CI219033
Pba.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Ppa.1646
Physcomitrella patens subsp. patens polycomb group protein (SDG1501) mRNA, complete cds /cds=p(165,2843) /gb=XM_001768136
Pth.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Pth.5102
WS0256.B21_F07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0256_F07 3', mRNA sequence /clone=WS0256_F07 /clone_end=3' /gb=CV245041
Sbi.7196
POL1_41_A10.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_41_A10_A002 5', mRNA sequence /clone=POL1_41_A10_A002 /clone_end=5' /gb=CF487051 /gi=34515920

Domain Architecture

SET PF00856 111860
DomainStartEndBit scoreE-value
SET666794151.91.9e-42

Sequences