Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 113504

Identification

Species:
Physcomitrella patens
Gene model
113504
Description
e_gw1.7.55.1
Family
SNF2
3D structure (top 5)
2FWR 1Z3I 1Z5Z 1Z63 3DMQ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481010 Score: 1

Arabidopsis thaliana

AT2G16390.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g14440.1 Score: 1
LOC_Os06g14440.2 Score: 1
LOC_Os06g14440.3 Score: 1
LOC_Os06g14440.4 Score: 1
LOC_Os07g25390.1 Score: 0.943

Populus trichocarpa

195587 Score: 1

Sorghum bicolor

4839144 Score: 1

Physcomitrella patens

113504 Score: 1
119270 Score: 1

Selaginella moellendorffii

441121 Score: 1

Zea mays

GRMZM2G064574_P01 Score: 1
GRMZM2G064574_P02 Score: 1
GRMZM2G093940_P01 Score: 1

Expression data

Expressed Sequence Tags

Ppa.18207
Physcomitrella patens subsp. patens predicted protein (CHR1509) mRNA, complete cds /cds=p(1,2859) /gb=XM_001757435

Domain Architecture

SNF2_N PF00176 113504
DomainStartEndBit scoreE-value
SNF2_N11947637.46.5e-11
Helicase_C49557364.83e-16

Sequences