Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 115268

Identification

Species:
Physcomitrella patens
Gene model
115268
Description
e_gw1.13.85.1
Family
SET
3D structure (top 5)
2H21
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

896938 Score: 1

Arabidopsis thaliana

AT3G07670.1 Score: 1

Chlorella sp. NC64A

142047 Score: 1

Carica papaya

evm.TU.supercontig_136.37 Score: 1

Chlamydomonas reinhardtii

195549 Score: 1

Micromonas pusilla CCMP1545

2803 Score: 1

Micromonas sp. RCC299

97985 Score: 1

Ostreococcus lucimarinus

2778 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g49326.1 Score: 1

Ostreococcus tauri

19327 Score: 1

Populus trichocarpa

573120 Score: 1

Sorghum bicolor

5055646 Score: 1

Selaginella moellendorffii

80789 Score: 1

Vitis vinifera

GSVIVP00029072001 Score: 1

Zea mays

GRMZM2G058700_P03 Score: 1
GRMZM2G077258_P03 Score: 1

Expression data

Expressed Sequence Tags

Mtr.19378
MTYDZ13TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV259708
Ppa.17429
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_115268) mRNA, partial cds /cds=p(1,1296) /gb=XM_001754200
Vvi.23406
VV_PEa18c10.b1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence /gb=EV229318

Domain Architecture

SET PF00856 115268
DomainStartEndBit scoreE-value
SET14250121.91.9e-33
Rubis-subs-bind274415576.6e-14

Sequences