Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 120051

Identification

Species:
Physcomitrella patens
Gene model
120051
Description
e_gw1.31.11.1
Family
HB
3D structure (top 5)
1NK2 2E1O 2CUE 2DMS 1PUF
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

477377 Score: 1

Arabidopsis thaliana

AT3G01470.1 Score: 1

Populus trichocarpa

661900 Score: 1

Physcomitrella patens

120051 Score: 1
6570 Score: 1

Vitis vinifera

GSVIVP00000088001 Score: 1
GSVIVP00028981001 Score: 1

Expression data

Expressed Sequence Tags

Ppa.10674
BY991514 ppls full-length cDNA library Physcomitrella patens subsp. patens cDNA clone PPLS139G11 5', mRNA sequence /clone=PPLS139G11 /clone_end=5' /gb=BY991514
Ppa.11132
Physcomitrella patens mRNA for homeobox protein PpHB9, complete cds /cds=p(1,657) /gb=AB028080
Ppa.161
Physcomitrella patens mRNA for homeobox protein PpHB2, partial cds /cds=p(1,821) /gb=AB028073
Ppa.162
Physcomitrella patens mRNA for homeobox protein PpHB1, partial cds /cds=p(1,793) /gb=AB028072
Ppa.25898
DC936717 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. patens cDNA clone ppgs23c15 5', mRNA sequence /clone=ppgs23c15 /clone_end=5' /gb=DC936717
Ppa.8098
BY991229 ppls full-length cDNA library Physcomitrella patens subsp. patens cDNA clone PPLS138K14 5', mRNA sequence /clone=PPLS138K14 /clone_end=5' /gb=BY991229
Ppa.8325
BY954724 ppls full-length cDNA library Physcomitrella patens subsp. patens cDNA clone PPLS041L22 5', mRNA sequence /clone=PPLS041L22 /clone_end=5' /gb=BY954724
Ppa.9753
BJ968285 ppsp full-length cDNA libary Physcomitrella patens subsp. patens cDNA clone ppsp46c11 5', mRNA sequence /clone=ppsp46c11 /clone_end=5' /gb=BJ968285
Vvi.17175
WIN0510.C21_K21 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0510_K21 3', mRNA sequence /clone=WIN0510_K21 /clone_end=3' /gb=EC935875
Vvi.4667
WIN0812.C21_D17 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN0812_D17 3', mRNA sequence /clone=WIN0812_D17 /clone_end=3' /gb=EC961661

Domain Architecture

Homeobox PF00046 120051
DomainStartEndBit scoreE-value
Homeobox13318767.93.3e-17
HALZ18823258.32.7e-14

Sequences