Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 120794

Identification

Species:
Physcomitrella patens
Gene model
120794
Description
e_gw1.34.11.1
Family
HB
3D structure (top 5)
1NK2 2R5Y 2DMT 2E1O 2CUE
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os02g49700.1 Score: 1.027
LOC_Os02g49700.2 Score: 1
LOC_Os02g49700.3 Score: 1

Physcomitrella patens

120794 Score: 1
234989 Score: 1

Zea mays

GRMZM2G139963_P01 Score: 1
GRMZM2G178741_P02 Score: 1

Expression data

Expressed Sequence Tags

Ppa.10674
BY991514 ppls full-length cDNA library Physcomitrella patens subsp. patens cDNA clone PPLS139G11 5', mRNA sequence /clone=PPLS139G11 /clone_end=5' /gb=BY991514
Ppa.157
Physcomitrella patens mRNA for homeobox protein Pphb8, complete cds /cds=p(191,1081) /gb=AB028079
Ppa.161
Physcomitrella patens mRNA for homeobox protein PpHB2, partial cds /cds=p(1,821) /gb=AB028073
Ppa.19715
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_127355) mRNA, complete cds /cds=p(1,1041) /gb=XM_001763980
Ppa.25898
DC936717 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. patens cDNA clone ppgs23c15 5', mRNA sequence /clone=ppgs23c15 /clone_end=5' /gb=DC936717
Ppa.8098
BY991229 ppls full-length cDNA library Physcomitrella patens subsp. patens cDNA clone PPLS138K14 5', mRNA sequence /clone=PPLS138K14 /clone_end=5' /gb=BY991229
Ppa.9753
BJ968285 ppsp full-length cDNA libary Physcomitrella patens subsp. patens cDNA clone ppsp46c11 5', mRNA sequence /clone=ppsp46c11 /clone_end=5' /gb=BJ968285

Domain Architecture

Homeobox PF00046 120794
DomainStartEndBit scoreE-value
Homeobox63117631e-15
HALZ11816249.89.4e-12

Sequences