Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 123490

Identification

Species:
Selaginella moellendorffii
Gene model
123490
Description
e_gw1.71.106.1
Family
C3H
3D structure (top 5)
1JMT 2DIT 2PE8 1O0P 2DNY
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Cre.14704
1031060C11.y1 C. reinhardtii CC-1690, Stress II (normalized), Lambda Zap II Chlamydomonas reinhardtii cDNA, mRNA sequence /gb=BI722157
Cre.2959
Chlamydomonas reinhardtii strain CC-503 cw92 mt+ /cds=p(146,967) /gb=XM_001696367
Hv.17740
EBem06_SQ003_F03_R embryo, 21 DPA, no treatment, cv Optic, EBem06 Hordeum vulgare subsp. vulgare cDNA clone EBem06_SQ003_F03 5', mRNA sequence /clone=EBem06_SQ003_F03 /clone_end=5' /gb=BM375428
Mtr.12672
EST1225259 MTY Medicago truncatula cDNA clone MTYAF50, mRNA sequence /clone=MTYAF50 /gb=DW016298
Mtr.13807
EST1224886 MTY Medicago truncatula cDNA clone MTYAB27, mRNA sequence /clone=MTYAB27 /gb=DW015925
Os.48195
Oryza sativa Japonica Group cDNA, clone: J065168K03, full insert sequence /gb=AK241513
Pba.8652
WS01227.BR.1_A19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01227_A19 5', mRNA sequence /clone=WS01227_A19 /clone_end=5' /gb=DT472653
Pth.8652
WS01227.BR.1_A19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01227_A19 5', mRNA sequence /clone=WS01227_A19 /clone_end=5' /gb=DT472653
Ptp.7176
R053H03.5pR Populus root cDNA library Populus tremula x Populus tremuloides cDNA clone R053H03 5', mRNA sequence /clone=R053H03 /clone_end=5' /gb=DN498047
Sbi.14767
WOUND1_17_F06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_17_F06_A002 5', mRNA sequence /clone=WOUND1_17_F06_A002 /clone_end=5' /gb=CN143684 /gi=45981705

Domain Architecture

zf-CCCH PF00642 123490
DomainStartEndBit scoreE-value
zf-CCCH1642409.5e-09
zf-CCCH15017516.50.01

Sequences