Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 124417

Identification

Species:
Sorghum bicolor
Gene model
124417
Description
fgenesh1_pm.C_chr_2000185
Family
BBR/BPC

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.28559
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH8ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX821002
Hv.28602
HDP38G13w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP38G13, mRNA sequence /clone=HDP38G13 /gb=EX600166
Os.20496
Oryza sativa Japonica Group cDNA clone:001-118-H02, full insert sequence /gb=AK063643
Os.23269
Oryza sativa (japonica cultivar-group) barley B recombinant like protein C mRNA, complete cds /cds=p(253,1284) /gb=AY570521
Os.89552
Oryza sativa (japonica cultivar-group) barley B recombinant like-protein B mRNA, complete cds /cds=p(62,1087) /gb=AY569037
Pba.10464
WS02553.C21_L06 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_L06 3', mRNA sequence /clone=WS02553_L06 /clone_end=3' /gb=DT493203
Pba.1761
WS0251.B21_K21 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0251_K21 3', mRNA sequence /clone=WS0251_K21 /clone_end=3' /gb=CV240544
Pth.1761
WS02553.C21_L06 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_L06 3', mRNA sequence /clone=WS02553_L06 /clone_end=3' /gb=DT493203
Vvi.16621
VV_PEa13e06.g1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence /gb=EV230674
Vvi.3378
Vitis vinifera GAGA-binding transcriptional activator BBR/BPC1-like mRNA, complete cds /cds=p(43,924) /gb=EU597743

Domain Architecture

DUF1004 PF06217 124417
DomainStartEndBit scoreE-value
DUF10042299415.58.5e-122

Sequences