Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 127676

Identification

Species:
Sorghum bicolor
Gene model
127676
Description
fgenesh1_pm.C_chr_4000979
Family
HB
3D structure (top 5)
2CUF 2DMS 2R5Y 2DA6 1PUF
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os02g43330.1 Score: 1

Physcomitrella patens

132443 Score: 1

Populus trichocarpa

572441 Score: 1

Zea mays

GRMZM2G117164_P01 Score: 1

Expression data

Expressed Sequence Tags

Os.12134
Oryza sativa Japonica Group cDNA clone:002-155-H12, full insert sequence /gb=AK109177
Os.49245
Oryza sativa Japonica Group cDNA clone:001-119-F01, full insert sequence /cds=p(93,878) /gb=AK063685
Os.84462
Oryza sativa Japonica Group cDNA, clone: J065054D22, full insert sequence /gb=AK287604
Sbi.10757
WS1_94_A10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA sequence /gb=BE592382
Sbi.2205
ABA1_39_H08.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor cDNA clone ABA1_39_H08_A012 5', mRNA sequence /clone=ABA1_39_H08_A012 /clone_end=5' /gb=CB929116 /gi=30165387

Domain Architecture

Homeobox PF00046 127676
DomainStartEndBit scoreE-value
Homeobox278266.31.2e-16
HALZ8312739.11.7e-08

Sequences