Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 131143

Identification

Species:
Physcomitrella patens
Gene model
131143
Description
e_gw1.86.32.1
Family
C3H
3D structure (top 5)
2E5S 2RPP 1M9O 2D9N 3D2N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

478627 Score: 1

Arabidopsis thaliana

AT3G12680.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g42970.1 Score: 1
LOC_Os01g42970.2 Score: 1

Populus trichocarpa

659387 Score: 1

Sorghum bicolor

4879172 Score: 1

Vitis vinifera

GSVIVP00002135001 Score: 1

Zea mays

GRMZM2G093281_P02 Score: 1
GRMZM2G122777_P02 Score: 1

Expression data

Expressed Sequence Tags

Ppa.3506
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_131143) mRNA, partial cds /cds=p(1,972) /gb=XM_001766659

Domain Architecture

zf-CCCH PF00642 131143
DomainStartEndBit scoreE-value
zf-CCCH53134.24.6e-07
zf-CCCH497544.63.4e-10
zf-CCCH11113734.73.4e-07
zf-CCCH19121743.48e-10
zf-CCCH24527138.13.2e-08

Sequences