Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 132443

Identification

Species:
Physcomitrella patens
Gene model
132443
Description
e_gw1.96.4.1
Family
HB
3D structure (top 5)
2R5Y 1B72 2ECB 2CUF 1JGG
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

127676 Score: 1

Expression data

Expressed Sequence Tags

Ppa.10674
BY991514 ppls full-length cDNA library Physcomitrella patens subsp. patens cDNA clone PPLS139G11 5', mRNA sequence /clone=PPLS139G11 /clone_end=5' /gb=BY991514
Ppa.11132
Physcomitrella patens mRNA for homeobox protein PpHB9, complete cds /cds=p(1,657) /gb=AB028080
Ppa.11823
Physcomitrella patens mRNA for homeobox protein PpHB6, complete cds /cds=p(240,1277) /gb=AB028077
Ppa.14003
Physcomitrella patens mRNA for homeobox protein PpHB5, complete cds /cds=p(375,1298) /gb=AB028076
Ppa.25898
DC936717 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. patens cDNA clone ppgs23c15 5', mRNA sequence /clone=ppgs23c15 /clone_end=5' /gb=DC936717
Ppa.8098
BY991229 ppls full-length cDNA library Physcomitrella patens subsp. patens cDNA clone PPLS138K14 5', mRNA sequence /clone=PPLS138K14 /clone_end=5' /gb=BY991229
Ppa.9753
BJ968285 ppsp full-length cDNA libary Physcomitrella patens subsp. patens cDNA clone ppsp46c11 5', mRNA sequence /clone=ppsp46c11 /clone_end=5' /gb=BJ968285

Domain Architecture

Homeobox PF00046 132443
DomainStartEndBit scoreE-value
Homeobox9615070.36.6e-18
HALZ15119232.41.6e-06

Sequences