Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 133546

Identification

Species:
Selaginella moellendorffii
Gene model
133546
Description
e_gw1.119.48.1
Family
MYB-related
3D structure (top 5)
1IRZ 1OFC 2ELK 2CU7 1X41
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.23392
Arabidopsis thaliana myb family transcription factor (AT5G47390) mRNA, complete cds /cds=p(212,1309) /gb=NM_124110
At.35354
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-29-L19 /cds=p(63,848) /gb=AK227711
Hv.6265
Hordeum vulgare mRNA for MYBSt1 protein /cds=p(1,945) /gb=AJ965496
Mtr.13735
MTYEC89TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV260876
Mtr.14074
EST1226559 MTY Medicago truncatula cDNA clone MTYAV63, mRNA sequence /clone=MTYAV63 /gb=DW017598
Mtr.16497
EST1227431 MTY Medicago truncatula cDNA clone MTYB701, mRNA sequence /clone=MTYB701 /gb=DW018470
Mtr.3679
EST1224491 MTY Medicago truncatula cDNA clone MTYA640, mRNA sequence /clone=MTYA640 /gb=DW015530
Os.11458
Oryza sativa Japonica Group clone KCB704E08 myb transcription factor mRNA, complete cds /cds=p(38,1189) /gb=EU837252
Os.3818
Oryza sativa Japonica Group cDNA clone:J023105I20, full insert sequence /cds=p(121,1221) /gb=AK071611
Ppa.6379
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_168779) mRNA, complete cds /cds=p(393,1349) /gb=XM_001775204
Pth.10577
Populus trichocarpa clone WS01230_F05 unknown mRNA /cds=p(116,1054) /gb=EF147391
Sbi.10737
ABA1_30_C02.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor cDNA clone ABA1_30_C02_A012 5', mRNA sequence /clone=ABA1_30_C02_A012 /clone_end=5' /gb=CB925970 /gi=30162241
Vvi.1267
VV_PEd0010c02.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV239979
Vvi.23289
VV_PEd03f02.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241970

Domain Architecture

Myb_DNA-binding PF00249 133546
DomainStartEndBit scoreE-value
Myb_DNA-binding9714438.23.4e-08

Sequences