Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 134186

Identification

Species:
Chlamydomonas reinhardtii
Gene model
134186
Description
estExt_gwp_1W.C_30096
Family
C3H
3D structure (top 5)
2CSY 2F42 2CKL 3FL2 1Z6U
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

887320 Score: 1

Arabidopsis thaliana

AT5G06420.1 Score: 1
AT5G06420.2 Score: 1

Chlorella sp. NC64A

31479 Score: 1

Carica papaya

evm.TU.supercontig_273.5 Score: 1

Coccomyxa sp. C-169

81230 Score: 1

Micromonas pusilla CCMP1545

4888 Score: 1

Micromonas sp. RCC299

70339 Score: 1

Ostreococcus lucimarinus

5242 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g19804.1 Score: 1

Ostreococcus tauri

13091 Score: 1

Physcomitrella patens

187995 Score: 1

Populus trichocarpa

731318 Score: 1

Sorghum bicolor

4882757 Score: 1

Selaginella moellendorffii

406998 Score: 1

Zea mays

AC191337.4_FGP036 Score: 1

Expression data

Expressed Sequence Tags

Cre.15665
Chlamydomonas reinhardtii predicted protein (CHLREDRAFT_134186) mRNA, complete cds /cds=p(1,924) /gb=XM_001696330
Os.6111
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA018I20, full insert sequence /gb=CT831567
Pba.6847
WS02536.B21_E24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02536_E24 3', mRNA sequence /clone=WS02536_E24 /clone_end=3' /gb=DT488393
Pth.6847
WS02536.B21_E24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02536_E24 3', mRNA sequence /clone=WS02536_E24 /clone_end=3' /gb=DT488393

Domain Architecture

zf-CCCH PF00642 134186
DomainStartEndBit scoreE-value
zf-CCCH16218844.63.9e-10

Sequences