Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 135927

Identification

Species:
Physcomitrella patens
Gene model
135927
Description
e_gw1.124.10.1
Family
RB
3D structure (top 5)
2R7G 2QDJ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

478590 Score: 1

Arabidopsis thaliana

AT3G12280.1 Score: 1

Carica papaya

evm.TU.supercontig_169.34 Score: 1

Coccomyxa sp. C-169

70385 Score: 1

Micromonas pusilla CCMP1545

48829 Score: 1

Physcomitrella patens

10529 Score: 1
135927 Score: 1

Ostreococcus lucimarinus

27862 Score: 1

Ostreococcus tauri

24582 Score: 1

Populus trichocarpa

639804 Score: 1

Vitis vinifera

GSVIVP00032361001 Score: 1

Physcomitrella patens

10529 Score: 1
135927 Score: 1

Zea mays

GRMZM2G033828_P01 Score: 1
GRMZM2G033828_P03 Score: 1
GRMZM2G137537_P02 Score: 1
GRMZM2G137537_P03 Score: 1
GRMZM2G033828_P02 Score: 0.996
GRMZM2G137537_P01 Score: 0.996

Expression data

Expressed Sequence Tags

Pba.3797
F079P63Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA sequence /gb=BI137072
Pth.3797
F079P63Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA sequence /gb=BI137072

Domain Architecture

RB_A PF01858 135927
DomainStartEndBit scoreE-value
RB_A395590318.21.6e-92
RB_B710841167.43.7e-47

Sequences