Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 138354

Identification

Species:
Physcomitrella patens
Gene model
138354
Description
e_gw1.145.11.1
Family
C3H
3D structure (top 5)
3BT7 1WXX 1U2Z 1UWV 2JJQ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

868960 Score: 1

Arabidopsis thaliana

AT2G28450.1 Score: 1

Carica papaya

evm.TU.supercontig_898.5 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g01480.1 Score: 1

Populus trichocarpa

833322 Score: 1

Sorghum bicolor

5056910 Score: 1

Vitis vinifera

GSVIVP00024526001 Score: 1

Zea mays

GRMZM2G147623_P01 Score: 1
GRMZM2G147623_P02 Score: 1

Expression data

Expressed Sequence Tags

At.44990
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT2G28450) mRNA, complete cds /cds=p(134,2563) /gb=NM_128405
Os.50217
Oryza sativa Japonica Group cDNA clone:J013030B09, full insert sequence /gb=AK120156
Ppa.5648
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_138354) mRNA, complete cds /cds=p(1,2295) /gb=XM_001772018

Domain Architecture

zf-CCCH PF00642 138354
DomainStartEndBit scoreE-value
zf-CCCH9411932.81.3e-06

Sequences