Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 139889

Identification

Species:
Chlorella sp. NC64A
Gene model
139889
Description
IGS.gm_27_00067
Family
C3H
3D structure (top 5)
2RPP 3D2N 3D2Q 2E5S 1M9O
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.12895
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT2G19810) mRNA, complete cds /cds=p(107,1186) /gb=NM_127539
At.23916
Arabidopsis thaliana ATCTH (Arabidopsis thaliana Cys3His zinc finger protein); transcription factor (ATCTH) mRNA, complete cds /cds=p(100,1047) /gb=NM_128150
At.4530
Arabidopsis thaliana unknown protein (At4g29190) mRNA, complete cds /cds=p(67,1137) /gb=AY045970
Cre.15393
Chlamydomonas reinhardtii predicted protein (CHLREDRAFT_182666) mRNA, partial cds /cds=p(119,487) /gb=XM_001693381
Os.20244
Oryza sativa Japonica Group cDNA clone:J023119N23, full insert sequence /cds=p(113,1273) /gb=AK100770
Os.31975
Oryza sativa Japonica Group cDNA clone:002-102-F01, full insert sequence /gb=AK106392
Pth.3311
Populus trichocarpa clone WS01117_K24 unknown mRNA /cds=p(46,1200) /gb=EF144742

Domain Architecture

zf-CCCH PF00642 139889
DomainStartEndBit scoreE-value
zf-CCCH739935.52.1e-07

Sequences