Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 142359

Identification

Species:
Selaginella moellendorffii
Gene model
142359
Description
estExt_Genewise1.C_40684
Family
PHD
3D structure (top 5)
1H3I 3BO5 2F69 1ML9 1MVH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Hv.28779
HDP28P14T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP28P14, mRNA sequence /clone=HDP28P14 /gb=EX593775
Pba.1904
WS0232.B21_L14 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_L14 3', mRNA sequence /clone=WS0232_L14 /clone_end=3' /gb=CV239535
Ppa.18391
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_145070) mRNA, complete cds /cds=p(1,2724) /gb=XM_001777540
Pth.12969
F033P65.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F033P65 3', mRNA sequence /clone=F033P65 /clone_end=3' /gb=CK090938
Pth.13471
WS0162.B21_F01 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_F01 3', mRNA sequence /clone=WS0162_F01 /clone_end=3' /gb=CV225758
Vvi.19260
VVI069F03_593334 CabSau Flower Stage 12 (FLOu0012) Vitis vinifera cDNA clone VVI069F03 5, mRNA sequence /clone=VVI069F03 /clone_end=5' /gb=DT021747
Vvi.21312
WIN1115.C21_N03 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1115_N03 3', mRNA sequence /clone=WIN1115_N03 /clone_end=3' /gb=EC982390

Domain Architecture

PHD PF00628 142359
DomainStartEndBit scoreE-value
PHD12317234.44.4e-07
SET418548176.39e-50

Sequences