Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 143132

Identification

Species:
Sorghum bicolor
Gene model
143132
Description
estExt_fgenesh1_pm.C_chr_30419
Family
C3H
3D structure (top 5)
2P6R 2ZJ8 1HEI 2J0S 2VBC
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483950 Score: 1

Arabidopsis thaliana

AT2G47680.1 Score: 1

Carica papaya

evm.TU.supercontig_9.260 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g15300.1 Score: 1
LOC_Os01g15300.2 Score: 0.907

Selaginella moellendorffii

173103 Score: 1

Vitis vinifera

GSVIVP00027989001 Score: 1

Zea mays

GRMZM2G146047_P02 Score: 1

Expression data

Expressed Sequence Tags

Hv.6919
AV836863 K. Sato unpublished cDNA library: Hordeum vulgare subsp. vulgare seedling leaves second leaf stage Hordeum vulgare subsp. vulgare cDNA clone basdi12, mRNA sequence /clone=basdi12 /gb=AV836863
Os.49825
Oryza sativa Japonica Group cDNA clone:J023078K23, full insert sequence /gb=AK100311
Pth.17511
Populus trichocarpa clone WS0128_O12 /gb=EF148229

Domain Architecture

Helicase_C PF00271 143132
DomainStartEndBit scoreE-value
Helicase_C29638940.85.5e-09
zf-CCCH73275728.23.4e-05
zf-CCCH75978517.40.0076

Sequences