Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 146672

Identification

Species:
Sorghum bicolor
Gene model
146672
Description
estExt_fgenesh1_pm.C_chr_100099
Family
C2H2

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

357440 Score: 1

Arabidopsis thaliana

AT5G52010.1 Score: 1

Carica papaya

evm.TU.supercontig_21.165 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g07020.1 Score: 1

Physcomitrella patens

24318 Score: 1

Populus trichocarpa

287111 Score: 1

Selaginella moellendorffii

56696 Score: 1

Vitis vinifera

GSVIVP00014863001 Score: 1

Zea mays

GRMZM2G086277_P01 Score: 1
GRMZM2G086277_P02 Score: 1

Expression data

Expressed Sequence Tags

At.9332
Arabidopsis thaliana zinc finger (C2H2 type) family protein (AT5G52010) mRNA, complete cds /cds=p(170,1360) /gb=NM_124580
Os.23613
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN087K01, full insert sequence /gb=CT833717
Ppa.19463
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_24318) mRNA, partial cds /cds=p(1,894) /gb=XM_001753744
Sbi.1514
GABR1_5_A09.b1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_5_A09_A002 3', mRNA sequence /clone=GABR1_5_A09_A002 /clone_end=3' /gb=CX612875 /gi=57811595

Domain Architecture

zf-C2H2 PF00096 146672
DomainStartEndBit scoreE-value
zf-C2H215017326.79.8e-05

Sequences