Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 147184

Identification

Species:
Sorghum bicolor
Gene model
147184
Description
estExt_fgenesh1_kg.C_chr_10161
Family
bHLH
3D structure (top 5)
1AM9 1NKP 1HLO 1NLW 2QL2
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481136 Score: 1

Arabidopsis thaliana

AT2G22750.2 Score: 1
AT2G22750.1 Score: 0.98

Carica papaya

evm.TU.supercontig_20.65 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g51580.1 Score: 1

Populus trichocarpa

202289 Score: 1

Vitis vinifera

GSVIVP00003970001 Score: 1
GSVIVP00004795001 Score: 1

Zea mays

GRMZM2G019806_P01 Score: 1

Expression data

Expressed Sequence Tags

At.39395
Arabidopsis thaliana clone bHLH018 putative bHLH transcription factor mRNA, complete cds /cds=p(1,915) /gb=AF488562
Os.7441
Oryza sativa Japonica Group cDNA clone:J013129F07, full insert sequence /cds=p(91,1170) /gb=AK120539
Sbi.3401
OX1_63_C04.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_63_C04_A002 5', mRNA sequence /clone=OX1_63_C04_A002 /clone_end=5' /gb=CN138399 /gi=45972782

Domain Architecture

HLH PF00010 147184
DomainStartEndBit scoreE-value
HLH17522447.45.7e-11

Sequences